Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FOC71_RS00585 Genome accession   NZ_CP053999
Coordinates   115764..117035 (-) Length   423 a.a.
NCBI ID   WP_003074047.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 110764..122035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS00560 (FOC71_00560) - 111298..111594 (-) 297 WP_003074063.1 hypothetical protein -
  FOC71_RS00565 (FOC71_00565) - 111611..112003 (-) 393 WP_003074061.1 hypothetical protein -
  FOC71_RS00570 (FOC71_00570) - 111985..113301 (-) 1317 WP_003074053.1 hypothetical protein -
  FOC71_RS00575 (FOC71_00575) - 113304..113690 (-) 387 WP_003074050.1 DUF1310 family protein -
  FOC71_RS00580 (FOC71_00580) - 113871..115730 (-) 1860 WP_003074048.1 proline--tRNA ligase -
  FOC71_RS00585 (FOC71_00585) eeP 115764..117035 (-) 1272 WP_003074047.1 RIP metalloprotease Regulator
  FOC71_RS00590 (FOC71_00590) - 117187..117990 (-) 804 WP_003074045.1 phosphatidate cytidylyltransferase -
  FOC71_RS00595 (FOC71_00595) - 117999..118748 (-) 750 WP_003074042.1 isoprenyl transferase -
  FOC71_RS00600 (FOC71_00600) yajC 119212..119550 (-) 339 WP_003074039.1 preprotein translocase subunit YajC -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45749.50 Da        Isoelectric Point: 9.5184

>NTDB_id=449979 FOC71_RS00585 WP_003074047.1 115764..117035(-) (eeP) [Streptococcus intermedius strain FDAARGOS_769]
MQAGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLSLNEAGKVIRINLSGKKIDQTALPMNVTSFDLENRLEITGLVLDEQKTYAVDHDATIVEEDGTEIRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASTGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMAVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=449979 FOC71_RS00585 WP_003074047.1 115764..117035(-) (eeP) [Streptococcus intermedius strain FDAARGOS_769]
ATGCAAGCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATAATCGTTGTTGTTCATGAATTTGGGCATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTGCGCGAGTTTTCCATTGGAATGGGTCCGAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTTGGTGGATATGTCCGTATGGCTGGCTGGGGTGAAGACTCAACT
GAGATTAAAACAGGCACACCTGCTAGTTTATCTTTGAATGAAGCAGGAAAGGTTATCCGGATTAATCTTTCAGGCAAGAA
AATCGATCAGACGGCTTTACCGATGAATGTGACGAGTTTTGATTTGGAAAATAGACTTGAAATTACGGGTCTGGTTCTAG
ATGAGCAGAAGACTTATGCAGTCGACCATGATGCAACCATCGTAGAAGAAGATGGAACAGAAATACGCATTGCTCCACTC
GATGTTCAATATCAAAATGCCAGTTTAGGTGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAATTTCATTTTGGG
GATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCACAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCTATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTCGCTGTTATGGCGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains


Predicted by InterproScan.

(10-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

63.789

98.582

0.629

  eeP Streptococcus thermophilus LMD-9

63.549

98.582

0.626