Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | I5367_RS06815 | Genome accession | NZ_CP065539 |
| Coordinates | 1302748..1304844 (-) | Length | 698 a.a. |
| NCBI ID | WP_012117416.1 | Uniprot ID | A7Z3Y3 |
| Organism | Bacillus amyloliquefaciens strain DGL1 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1297748..1309844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5367_RS06790 (I5367_06790) | - | 1298337..1298597 (+) | 261 | WP_003154690.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| I5367_RS06795 (I5367_06795) | - | 1298808..1300325 (-) | 1518 | WP_046559543.1 | ATP-binding protein | - |
| I5367_RS06800 (I5367_06800) | - | 1300524..1300970 (+) | 447 | WP_007408463.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| I5367_RS06805 (I5367_06805) | motB | 1301006..1301791 (-) | 786 | WP_003154685.1 | flagellar motor protein MotB | - |
| I5367_RS06810 (I5367_06810) | motA | 1301763..1302578 (-) | 816 | WP_007408461.1 | flagellar motor stator protein MotA | - |
| I5367_RS06815 (I5367_06815) | clpE | 1302748..1304844 (-) | 2097 | WP_012117416.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| I5367_RS06820 (I5367_06820) | - | 1305246..1306283 (+) | 1038 | WP_012117417.1 | membrane protein | - |
| I5367_RS06825 (I5367_06825) | - | 1306381..1307502 (+) | 1122 | WP_012117418.1 | hypothetical protein | - |
| I5367_RS06830 (I5367_06830) | queC | 1307752..1308411 (+) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| I5367_RS06835 (I5367_06835) | queD | 1308412..1308855 (+) | 444 | WP_007408455.1 | 6-carboxytetrahydropterin synthase QueD | - |
| I5367_RS06840 (I5367_06840) | queE | 1308848..1309579 (+) | 732 | WP_003154676.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 77768.84 Da Isoelectric Point: 5.4325
>NTDB_id=449975 I5367_RS06815 WP_012117416.1 1302748..1304844(-) (clpE) [Bacillus amyloliquefaciens strain DGL1]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPAMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDHEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALHEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVLEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDE
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDNNEIKAFHVVMEEDGIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPAMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDHEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALHEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVLEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDE
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDNNEIKAFHVVMEEDGIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=449975 I5367_RS06815 WP_012117416.1 1302748..1304844(-) (clpE) [Bacillus amyloliquefaciens strain DGL1]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGGCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATCATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAACGTCATCTTGTT
CATTGACGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
TGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAATGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAGCTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCATGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCGTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATCATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTCAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCCTGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTAACGGACGAA
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCAGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATAACAACGAAATAAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGGCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATCATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAACGTCATCTTGTT
CATTGACGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
TGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAATGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAGCTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCATGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCGTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATCATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTCAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCCTGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTAACGGACGAA
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCAGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATAACAACGAAATAAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
56.735 |
100 |
0.597 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.54 |
100 |
0.595 |
| clpE | Streptococcus pneumoniae Rx1 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae R6 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae D39 |
56.267 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae TIGR4 |
56.267 |
100 |
0.592 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.232 |
91.404 |
0.496 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.311 |
91.261 |
0.423 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus pneumoniae Rx1 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus pneumoniae D39 |
45.88 |
88.682 |
0.407 |
| clpC | Streptococcus thermophilus LMD-9 |
45.381 |
88.395 |
0.401 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.733 |
88.395 |
0.395 |
| clpC | Streptococcus mutans UA159 |
44.3 |
87.966 |
0.39 |