Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FOC73_RS05960 | Genome accession | NZ_CP053998 |
| Coordinates | 1216477..1218927 (+) | Length | 816 a.a. |
| NCBI ID | WP_004182161.1 | Uniprot ID | A0A1V0H7N7 |
| Organism | Streptococcus salivarius strain FDAARGOS_771 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1211477..1223927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC73_RS05935 (FOC73_05935) | ahpC | 1212373..1212933 (-) | 561 | WP_004182174.1 | alkyl hydroperoxide reductase subunit C | - |
| FOC73_RS05940 (FOC73_05940) | rpsB | 1213206..1213973 (+) | 768 | WP_002886342.1 | 30S ribosomal protein S2 | - |
| FOC73_RS05945 (FOC73_05945) | tsf | 1214084..1215124 (+) | 1041 | WP_002886343.1 | translation elongation factor Ts | - |
| FOC73_RS05950 (FOC73_05950) | - | 1215233..1215703 (-) | 471 | WP_004182164.1 | small multi-drug export protein | - |
| FOC73_RS05955 (FOC73_05955) | - | 1216021..1216476 (+) | 456 | WP_002889615.1 | CtsR family transcriptional regulator | - |
| FOC73_RS05960 (FOC73_05960) | clpC | 1216477..1218927 (+) | 2451 | WP_004182161.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FOC73_RS05965 (FOC73_05965) | pbp3 | 1219057..1220313 (-) | 1257 | WP_022496763.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| FOC73_RS05970 (FOC73_05970) | pbp3 | 1220458..1221705 (-) | 1248 | WP_037605127.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90122.49 Da Isoelectric Point: 6.0145
>NTDB_id=449952 FOC73_RS05960 WP_004182161.1 1216477..1218927(+) (clpC) [Streptococcus salivarius strain FDAARGOS_771]
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALGAMLQEAEGIAGVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKTSGNFANMMQPPQSSTGELADYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKLEITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALGAMLQEAEGIAGVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKTSGNFANMMQPPQSSTGELADYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKLEITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
Nucleotide
Download Length: 2451 bp
>NTDB_id=449952 FOC73_RS05960 WP_004182161.1 1216477..1218927(+) (clpC) [Streptococcus salivarius strain FDAARGOS_771]
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCGCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTTCT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACCGCTGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGGGGCTATGTTGCAAGAGGCAGAGGGAATTGCTGGTGTGACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGCGATAAGCCTCGTATTATCGATTTACGACGTTCTTTGGAGCGTTATGCAGGTCTTAGT
AAGCAAGATTTGAAGGCCATTCATGATCTTCGTAAGCCTAAAAAATCAAAGACATCAGGAAATTTTGCTAATATGATGCA
GCCTCCTCAATCTTCTACTGGGGAGTTGGCAGATTATACCAAGGACTTAACGGCAGTGGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTG
GGTGAAGCAGGTGTTGGTAAGACGGCACTTGCGCTTGGCTTAGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGTT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGCGATTTCGAAGAACGTA
TGAATCAGATCATTGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAATTGCATACGATTATCGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCGAATATTTTGAAACCCGCTCTAGCACGTGGAACCCTTCATATGGTTGG
AGCAACTACTCAAGCTGAGTACCAGAAGCATATTGAGAAAGATGCAGCTCTTTCTCGCCGTTTTGCTAAGATTACAATCG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGGTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAGGCGGTTGAGACAGCAGTCAAGGCAGCCCACCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCAACTGTTCAAGGTCGTATCAAAAAAGAAGCCAAACTTGAAATAACGCCTTTGGACGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCAGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATTCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTGAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAAGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACCGGAAAACGCCCGATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCTTTGGCGGAGGTTCTCTTTGATGATGAGTCAGCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGCCTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGTGGTGAGTTAACAG
AAAAAGTTCGTAACAAGCCTTACTCAGTTCTTCTTTTTGACGAGGTAGAAAAGGCTCACCCAGACATTTTCAACATTCTC
TTACAGGTTTTGGATGATGGTGTCTTGACGGATAGTCGAGGTCGTAAAGTCGACTTCTCAAATACCATTATCATAATGAC
TTCGAACTTGGGGGCGACTGCTCTTCGCGATGATAAGACTGTTGGTTTTGGTGCTCGAGACATTTCTCATAATCATCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGTCCAGAGTTTATCAACCGTATTGATGAGAAGGTTGTC
TTCCATAGCTTAGAGGAAGAACAGCTTCGTGAGATTGTCAAAATTATGGTAAAACCGTTGGTTTCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAGCATTTGGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTTGAGGATAAGTTATCTGAGCTCTTACTAGGCGGCCAAGTAGTGAGTGGACAA
ACCCTTAAGATTGGTTGTTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCGCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTTCT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACCGCTGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGGGGCTATGTTGCAAGAGGCAGAGGGAATTGCTGGTGTGACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGCGATAAGCCTCGTATTATCGATTTACGACGTTCTTTGGAGCGTTATGCAGGTCTTAGT
AAGCAAGATTTGAAGGCCATTCATGATCTTCGTAAGCCTAAAAAATCAAAGACATCAGGAAATTTTGCTAATATGATGCA
GCCTCCTCAATCTTCTACTGGGGAGTTGGCAGATTATACCAAGGACTTAACGGCAGTGGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTG
GGTGAAGCAGGTGTTGGTAAGACGGCACTTGCGCTTGGCTTAGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGTT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGCGATTTCGAAGAACGTA
TGAATCAGATCATTGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAATTGCATACGATTATCGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCGAATATTTTGAAACCCGCTCTAGCACGTGGAACCCTTCATATGGTTGG
AGCAACTACTCAAGCTGAGTACCAGAAGCATATTGAGAAAGATGCAGCTCTTTCTCGCCGTTTTGCTAAGATTACAATCG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGGTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAGGCGGTTGAGACAGCAGTCAAGGCAGCCCACCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCAACTGTTCAAGGTCGTATCAAAAAAGAAGCCAAACTTGAAATAACGCCTTTGGACGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCAGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATTCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTGAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAAGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACCGGAAAACGCCCGATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCTTTGGCGGAGGTTCTCTTTGATGATGAGTCAGCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGCCTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGTGGTGAGTTAACAG
AAAAAGTTCGTAACAAGCCTTACTCAGTTCTTCTTTTTGACGAGGTAGAAAAGGCTCACCCAGACATTTTCAACATTCTC
TTACAGGTTTTGGATGATGGTGTCTTGACGGATAGTCGAGGTCGTAAAGTCGACTTCTCAAATACCATTATCATAATGAC
TTCGAACTTGGGGGCGACTGCTCTTCGCGATGATAAGACTGTTGGTTTTGGTGCTCGAGACATTTCTCATAATCATCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGTCCAGAGTTTATCAACCGTATTGATGAGAAGGTTGTC
TTCCATAGCTTAGAGGAAGAACAGCTTCGTGAGATTGTCAAAATTATGGTAAAACCGTTGGTTTCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAGCATTTGGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTTGAGGATAAGTTATCTGAGCTCTTACTAGGCGGCCAAGTAGTGAGTGGACAA
ACCCTTAAGATTGGTTGTTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus thermophilus LMG 18311 |
94.975 |
100 |
0.95 |
| clpC | Streptococcus thermophilus LMD-9 |
94.853 |
100 |
0.949 |
| clpC | Streptococcus mutans UA159 |
73.162 |
100 |
0.732 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.402 |
100 |
0.674 |
| clpC | Streptococcus pneumoniae Rx1 |
67.402 |
100 |
0.674 |
| clpC | Streptococcus pneumoniae D39 |
67.402 |
100 |
0.674 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.464 |
100 |
0.509 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.78 |
100 |
0.472 |
| clpE | Streptococcus mutans UA159 |
47.673 |
76.348 |
0.364 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.932 |
81.005 |
0.364 |