Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IQE12_RS02890 Genome accession   NZ_CP065515
Coordinates   594065..594868 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GDY8P96A     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 589065..599868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQE12_RS02870 (IQE12_02870) - 590611..591948 (+) 1338 WP_197668999.1 aminotransferase class V-fold PLP-dependent enzyme -
  IQE12_RS02875 (IQE12_02875) tmk 591950..592567 (+) 618 WP_001272131.1 dTMP kinase -
  IQE12_RS02880 (IQE12_02880) - 592595..592924 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  IQE12_RS02885 (IQE12_02885) - 593138..594064 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  IQE12_RS02890 (IQE12_02890) yaaT 594065..594868 (+) 804 WP_001134193.1 PSP1 domain-containing protein Regulator
  IQE12_RS02895 (IQE12_02895) yabA 594885..595232 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  IQE12_RS02900 (IQE12_02900) - 595506..596231 (+) 726 WP_000910684.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IQE12_RS02905 (IQE12_02905) - 596224..596472 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  IQE12_RS02910 (IQE12_02910) rsmI 596474..597313 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IQE12_RS02915 (IQE12_02915) metG 597598..599571 (+) 1974 WP_001051130.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=449841 IQE12_RS02890 WP_001134193.1 594065..594868(+) (yaaT) [Staphylococcus aureus strain GDY8P96A]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=449841 IQE12_RS02890 WP_001134193.1 594065..594868(+) (yaaT) [Staphylococcus aureus strain GDY8P96A]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622