Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STCNRZ1202_RS05210 Genome accession   NZ_CP065506
Coordinates   981539..982021 (-) Length   160 a.a.
NCBI ID   WP_082308976.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 976539..987021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS05190 (STCNRZ1202_05225) pepT 977019..978242 (-) 1224 WP_347229538.1 peptidase T -
  STCNRZ1202_RS05195 (STCNRZ1202_05230) lepB 978451..979008 (-) 558 WP_002953084.1 signal peptidase I -
  STCNRZ1202_RS05200 (STCNRZ1202_05235) - 979131..980360 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  STCNRZ1202_RS05205 (STCNRZ1202_05240) - 980350..981528 (-) 1179 WP_011227264.1 AI-2E family transporter -
  STCNRZ1202_RS05210 (STCNRZ1202_05245) mutX 981539..982021 (-) 483 WP_082308976.1 8-oxo-dGTP diphosphatase Machinery gene
  STCNRZ1202_RS05215 (STCNRZ1202_05250) ftsX 982177..983106 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STCNRZ1202_RS05220 (STCNRZ1202_05255) ftsE 983099..983791 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STCNRZ1202_RS05230 (STCNRZ1202_05265) queG 985030..986148 (-) 1119 WP_084829636.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18842.29 Da        Isoelectric Point: 4.6250

>NTDB_id=449775 STCNRZ1202_RS05210 WP_082308976.1 981539..982021(-) (mutX) [Streptococcus thermophilus strain CNRZ1202]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDT

Nucleotide


Download         Length: 483 bp        

>NTDB_id=449775 STCNRZ1202_RS05210 WP_082308976.1 981539..982021(-) (mutX) [Streptococcus thermophilus strain CNRZ1202]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATACA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706