Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STCNRZ1202_RS02560 Genome accession   NZ_CP065506
Coordinates   480390..481196 (+) Length   268 a.a.
NCBI ID   WP_179974312.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 475390..486196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS02540 (STCNRZ1202_02570) tuf 476440..477636 (+) 1197 WP_002949971.1 elongation factor Tu -
  STCNRZ1202_RS02545 (STCNRZ1202_02575) tpiA 477884..478642 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  STCNRZ1202_RS02550 (STCNRZ1202_02580) tmk 478880..479509 (+) 630 WP_002946312.1 dTMP kinase -
  STCNRZ1202_RS02555 (STCNRZ1202_02585) - 479518..480393 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  STCNRZ1202_RS02560 (STCNRZ1202_02590) yaaT 480390..481196 (+) 807 WP_179974312.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STCNRZ1202_RS02565 (STCNRZ1202_02595) yabA 481183..481503 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  STCNRZ1202_RS02570 (STCNRZ1202_02600) rsmI 481506..482372 (+) 867 WP_347229698.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STCNRZ1202_RS02575 (STCNRZ1202_02605) - 482508..483743 (+) 1236 WP_022096936.1 ammonium transporter -
  STCNRZ1202_RS02580 (STCNRZ1202_02610) - 483754..484095 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  STCNRZ1202_RS02585 (STCNRZ1202_02615) - 484193..484849 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  STCNRZ1202_RS02590 (STCNRZ1202_02620) - 484872..485693 (+) 822 WP_180477216.1 Cof-type HAD-IIB family hydrolase -
  STCNRZ1202_RS02595 (STCNRZ1202_02625) - 485712..486183 (-) 472 Protein_451 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29686.10 Da        Isoelectric Point: 4.6342

>NTDB_id=449757 STCNRZ1202_RS02560 WP_179974312.1 480390..481196(+) (yaaT) [Streptococcus thermophilus strain CNRZ1202]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPDVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVGIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=449757 STCNRZ1202_RS02560 WP_179974312.1 480390..481196(+) (yaaT) [Streptococcus thermophilus strain CNRZ1202]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGATGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTTGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGGCATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.445

98.134

0.407