Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FOC87_RS10540 Genome accession   NZ_CP053981
Coordinates   2058496..2058672 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain FDAARGOS_793     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053496..2063672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC87_RS10520 (FOC87_10520) clpB 2053833..2056433 (+) 2601 WP_000365382.1 ATP-dependent chaperone ClpB -
  FOC87_RS10525 (FOC87_10525) - 2056467..2056649 (-) 183 WP_001211116.1 YjzD family protein -
  FOC87_RS10530 (FOC87_10530) - 2056806..2057540 (+) 735 WP_000028701.1 hydrolase -
  FOC87_RS10535 (FOC87_10535) - 2057570..2058442 (+) 873 WP_033680842.1 NAD(P)-dependent oxidoreductase -
  FOC87_RS10540 (FOC87_10540) comZ 2058496..2058672 (+) 177 WP_009879752.1 ComZ family protein Regulator
  FOC87_RS10545 (FOC87_10545) fabH 2059222..2060154 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  FOC87_RS10550 (FOC87_10550) fabF 2060186..2061424 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  FOC87_RS10555 (FOC87_10555) - 2061531..2062319 (+) 789 WP_000513290.1 DUF2268 domain-containing protein -
  FOC87_RS10560 (FOC87_10560) - 2062463..2063209 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=449666 FOC87_RS10540 WP_009879752.1 2058496..2058672(+) (comZ) [Bacillus thuringiensis strain FDAARGOS_793]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=449666 FOC87_RS10540 WP_009879752.1 2058496..2058672(+) (comZ) [Bacillus thuringiensis strain FDAARGOS_793]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586