Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FOC89_RS19695 Genome accession   NZ_CP053980
Coordinates   3203919..3204095 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain FDAARGOS_795     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3198919..3209095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC89_RS19675 (FOC89_19670) clpB 3199256..3201856 (+) 2601 WP_000365381.1 ATP-dependent chaperone ClpB -
  FOC89_RS19680 (FOC89_19675) - 3201890..3202072 (-) 183 WP_001211116.1 YjzD family protein -
  FOC89_RS19685 (FOC89_19680) - 3202229..3202963 (+) 735 WP_000028701.1 hydrolase -
  FOC89_RS19690 (FOC89_19685) - 3202993..3203865 (+) 873 WP_017650999.1 NAD(P)-dependent oxidoreductase -
  FOC89_RS19695 (FOC89_19690) comZ 3203919..3204095 (+) 177 WP_009879752.1 ComZ family protein Regulator
  FOC89_RS19700 (FOC89_19695) fabH 3204486..3205418 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  FOC89_RS19705 (FOC89_19700) fabF 3205450..3206688 (+) 1239 WP_000412649.1 beta-ketoacyl-ACP synthase II -
  FOC89_RS19710 (FOC89_19705) - 3206795..3207583 (+) 789 WP_000513289.1 DUF2268 domain-containing protein -
  FOC89_RS19715 (FOC89_19710) - 3207727..3208473 (+) 747 WP_000966135.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=449631 FOC89_RS19695 WP_009879752.1 3203919..3204095(+) (comZ) [Bacillus thuringiensis strain FDAARGOS_795]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=449631 FOC89_RS19695 WP_009879752.1 3203919..3204095(+) (comZ) [Bacillus thuringiensis strain FDAARGOS_795]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586