Detailed information NTG0449619

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC89_RS13840
• Genome accession: NZ_CP053980
• Coordinates: 2065542..2066669 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus thuringiensis strain FDAARGOS_795
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2060542..2071669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC89_RS13810 (FOC89_13805)	spoIIIJ	2060588..2061355 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
FOC89_RS13815 (FOC89_13810)	rnpA	2061395..2061754 (-)	360	WP_000726628.1	ribonuclease P protein component	-
FOC89_RS13820 (FOC89_13815)	rpmH	2061831..2061965 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC89_RS13825 (FOC89_13820)	dnaA	2062531..2063871 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
FOC89_RS13830 (FOC89_13825)	dnaN	2064050..2065189 (+)	1140	WP_001212527.1	DNA polymerase III subunit beta	-
FOC89_RS13835 (FOC89_13830)	yaaA	2065317..2065529 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
FOC89_RS13840 (FOC89_13835)	recF	2065542..2066669 (+)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
FOC89_RS13845 (FOC89_13840)	gyrB	2066708..2068630 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC89_RS13850 (FOC89_13845)	gyrA	2068719..2071190 (+)	2472	WP_001282849.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=449619 FOC89_RS13840 WP_000470750.1 2065542..2066669(+) (recF) [Bacillus thuringiensis strain FDAARGOS_795]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=449619 FOC89_RS13840 WP_000470750.1 2065542..2066669(+) (recF) [Bacillus thuringiensis strain FDAARGOS_795]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651