Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   FOC90_RS22220 Genome accession   NZ_CP053972
Coordinates   3611203..3611886 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain FDAARGOS_796     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3606203..3616886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC90_RS22200 (FOC90_22210) - 3607269..3608915 (+) 1647 WP_000727253.1 peptide ABC transporter substrate-binding protein -
  FOC90_RS22205 (FOC90_22215) - 3608943..3609146 (-) 204 WP_000559983.1 hypothetical protein -
  FOC90_RS22210 (FOC90_22220) spx 3609738..3610133 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  FOC90_RS22215 (FOC90_22225) - 3610183..3610857 (-) 675 WP_000362600.1 TerC family protein -
  FOC90_RS22220 (FOC90_22230) mecA 3611203..3611886 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  FOC90_RS22225 (FOC90_22235) - 3611959..3613503 (+) 1545 WP_000799189.1 cardiolipin synthase -
  FOC90_RS22230 (FOC90_22240) - 3613584..3614828 (+) 1245 WP_000628324.1 competence protein CoiA -
  FOC90_RS22235 (FOC90_22245) pepF 3614880..3616706 (+) 1827 WP_000003356.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=449587 FOC90_RS22220 WP_000350716.1 3611203..3611886(+) (mecA) [Bacillus thuringiensis strain FDAARGOS_796]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=449587 FOC90_RS22220 WP_000350716.1 3611203..3611886(+) (mecA) [Bacillus thuringiensis strain FDAARGOS_796]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564