Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FOC90_RS16550 | Genome accession | NZ_CP053972 |
| Coordinates | 2501893..2504328 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971172.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain FDAARGOS_796 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2496893..2509328
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC90_RS16535 (FOC90_16545) | ctsR | 2499621..2500082 (+) | 462 | WP_001244560.1 | transcriptional regulator CtsR | - |
| FOC90_RS16540 (FOC90_16550) | - | 2500253..2500801 (+) | 549 | WP_000128374.1 | UvrB/UvrC motif-containing protein | - |
| FOC90_RS16545 (FOC90_16555) | - | 2500806..2501870 (+) | 1065 | WP_000050840.1 | protein arginine kinase | - |
| FOC90_RS16550 (FOC90_16560) | clpC | 2501893..2504328 (+) | 2436 | WP_000971172.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| FOC90_RS16555 (FOC90_16565) | radA | 2504424..2505800 (+) | 1377 | WP_001085199.1 | DNA repair protein RadA | Machinery gene |
| FOC90_RS16560 (FOC90_16570) | disA | 2505804..2506877 (+) | 1074 | WP_000392164.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| FOC90_RS16565 (FOC90_16575) | - | 2507040..2508143 (+) | 1104 | WP_000919681.1 | PIN/TRAM domain-containing protein | - |
| FOC90_RS16570 (FOC90_16580) | ispD | 2508160..2508840 (+) | 681 | WP_000288312.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90626.51 Da Isoelectric Point: 6.3246
>NTDB_id=449575 FOC90_RS16550 WP_000971172.1 2501893..2504328(+) (clpC) [Bacillus thuringiensis strain FDAARGOS_796]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEEAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSATNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEEAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=449575 FOC90_RS16550 WP_000971172.1 2501893..2504328(+) (clpC) [Bacillus thuringiensis strain FDAARGOS_796]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTGTTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCATTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGAGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCCGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAATAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTGGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGCGG
TAAAGAAATTCAACGTGTAATTGAGGTATTAAGCCGTAGAACGAAAAATAACCCAGTATTAATTGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCTGGAACAAAATATCGCGGTGAATTTGAAGATCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGCTACAATGTATTGGGGCAACAACTTTAGATGAG
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGATCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCCTTACGTGATATGGAGCAACGCTTACGTGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAATTTAGAATCCATTCT
TCATGATCGTTTGATTGGTCAAGATGAAGCAGTAGTAGCAGTAGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTATTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTATTTAATATTCTACTACAAGTATTAGAAGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAACGTTGGTGCCGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAATGTCCAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGT
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACTCTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAACAAGAAATCGAATTGCACTTAACGGAAGA
GGCAATTTCAGCTATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCACTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCAGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTGTTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCATTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGAGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA
CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCCGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAATAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCAACAAATGCAAAT
ACACCGACACTGGACAGTTTAGCAAGGGACTTAACAGTTGTTGCACGTGAAAATCGCTTAGACCCTGTTATTGGACGCGG
TAAAGAAATTCAACGTGTAATTGAGGTATTAAGCCGTAGAACGAAAAATAACCCAGTATTAATTGGTGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCTGGAACAAAATATCGCGGTGAATTTGAAGATCGTTTAAAGAAAGTGATGGA
TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGCTACAATGTATTGGGGCAACAACTTTAGATGAG
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA
ATCGATTCAAATCTTGAAAGGTTTACGTGATCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG
CAGCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCCTTACGTGATATGGAGCAACGCTTACGTGAGAAGT
TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAATTTAGAATCCATTCT
TCATGATCGTTTGATTGGTCAAGATGAAGCAGTAGTAGCAGTAGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAGTATATGGAGAAGCATTCTACTTCCCGTTT
AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG
TTGTATTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTATTTAATATTCTACTACAAGTATTAGAAGATGGTCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAACGTTGGTGCCGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAATGTCCAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGT
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACTCTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAACAAGAAATCGAATTGCACTTAACGGAAGA
GGCAATTTCAGCTATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCACTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCAGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.802 |
99.877 |
0.857 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.209 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.718 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae Rx1 |
46.55 |
98.274 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.25 |
98.644 |
0.456 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.98 |
84.587 |
0.414 |