Detailed information NTG0449572

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC90_RS16045
• Genome accession: NZ_CP053972
• Coordinates: 2410017..2411144 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis strain FDAARGOS_796
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2405017..2416144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC90_RS16015 (FOC90_16025)	spoIIIJ	2405057..2405824 (-)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-
FOC90_RS16020 (FOC90_16030)	rnpA	2405877..2406224 (-)	348	WP_000726621.1	ribonuclease P protein component	-
FOC90_RS16025 (FOC90_16035)	rpmH	2406301..2406435 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC90_RS16030 (FOC90_16040)	dnaA	2407000..2408340 (+)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
FOC90_RS16035 (FOC90_16045)	dnaN	2408519..2409664 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
FOC90_RS16040 (FOC90_16050)	yaaA	2409792..2410004 (+)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
FOC90_RS16045 (FOC90_16055)	recF	2410017..2411144 (+)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
FOC90_RS16050 (FOC90_16060)	gyrB	2411184..2413106 (+)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC90_RS16055 (FOC90_16065)	gyrA	2413195..2415666 (+)	2472	WP_001282868.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=449572 FOC90_RS16045 WP_000470754.1 2410017..2411144(+) (recF) [Bacillus thuringiensis strain FDAARGOS_796]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=449572 FOC90_RS16045 WP_000470754.1 2410017..2411144(+) (recF) [Bacillus thuringiensis strain FDAARGOS_796]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648