Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STT55_RS02500 Genome accession   NZ_CP065502
Coordinates   460758..461564 (+) Length   268 a.a.
NCBI ID   WP_173940533.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST55     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 455758..466564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT55_RS02480 (STT55_02480) tuf 456807..458003 (+) 1197 WP_002949971.1 elongation factor Tu -
  STT55_RS02485 (STT55_02485) tpiA 458252..459010 (+) 759 WP_173940534.1 triose-phosphate isomerase -
  STT55_RS02490 (STT55_02490) tmk 459248..459877 (+) 630 WP_002946312.1 dTMP kinase -
  STT55_RS02495 (STT55_02495) - 459886..460761 (+) 876 WP_002946311.1 DNA polymerase III subunit delta' -
  STT55_RS02500 (STT55_02500) yaaT 460758..461564 (+) 807 WP_173940533.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STT55_RS02505 (STT55_02505) yabA 461551..461871 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  STT55_RS02510 (STT55_02510) rsmI 461874..462740 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STT55_RS02515 (STT55_02515) - 462877..464112 (+) 1236 WP_173940532.1 ammonium transporter -
  STT55_RS02520 (STT55_02520) - 464123..464464 (+) 342 WP_141326830.1 P-II family nitrogen regulator -
  STT55_RS02525 (STT55_02525) - 464562..465218 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  STT55_RS02530 (STT55_02530) - 465241..466062 (+) 822 WP_022096938.1 Cof-type HAD-IIB family hydrolase -
  STT55_RS02535 (STT55_02535) - 466081..466552 (-) 472 Protein_439 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5800

>NTDB_id=449544 STT55_RS02500 WP_173940533.1 460758..461564(+) (yaaT) [Streptococcus thermophilus strain ST55]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKIMFDKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=449544 STT55_RS02500 WP_173940533.1 460758..461564(+) (yaaT) [Streptococcus thermophilus strain ST55]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAATTATGTTTGACAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.825

98.134

0.41