Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STT128_RS05470 Genome accession   NZ_CP065500
Coordinates   1045123..1045935 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST128     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1040123..1050935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT128_RS05450 (STT128_05530) yidA 1041206..1042015 (+) 810 WP_011226081.1 sugar-phosphatase -
  STT128_RS05455 (STT128_05535) - 1042017..1043231 (+) 1215 WP_002953123.1 aminoacyltransferase -
  STT128_RS05460 (STT128_05540) - 1043290..1044539 (-) 1250 Protein_1020 ISL3 family transposase -
  STT128_RS05465 (STT128_05545) - 1044702..1045063 (-) 362 Protein_1021 YbaN family protein -
  STT128_RS05470 (STT128_05550) vicX 1045123..1045935 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  STT128_RS05475 (STT128_05555) vicK 1045941..1047281 (-) 1341 WP_011681205.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STT128_RS05480 (STT128_05560) yycF 1047274..1047981 (-) 708 WP_011681206.1 response regulator YycF -
  STT128_RS05485 (STT128_05565) - 1048508..1049275 (+) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  STT128_RS05490 (STT128_05570) - 1049287..1050120 (+) 834 WP_022096756.1 transporter substrate-binding domain-containing protein -
  STT128_RS05495 (STT128_05575) - 1050138..1050836 (+) 699 WP_014608374.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=449459 STT128_RS05470 WP_011681204.1 1045123..1045935(-) (vicX) [Streptococcus thermophilus strain ST128]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=449459 STT128_RS05470 WP_011681204.1 1045123..1045935(-) (vicX) [Streptococcus thermophilus strain ST128]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774