Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FOC76_RS12305 Genome accession   NZ_CP053955
Coordinates   2360368..2360826 (-) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus tropicus strain FDAARGOS_782     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2355368..2365826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC76_RS12280 (FOC76_12280) - 2355499..2357040 (-) 1542 WP_000445746.1 MDR family MFS transporter -
  FOC76_RS12285 (FOC76_12285) - 2357468..2357968 (+) 501 WP_000708170.1 hypothetical protein -
  FOC76_RS12290 (FOC76_12290) - 2358000..2358233 (-) 234 WP_000939451.1 SPP1 phage holin family protein -
  FOC76_RS12295 (FOC76_12295) - 2358398..2359039 (+) 642 WP_000680831.1 diguanylate cyclase -
  FOC76_RS12300 (FOC76_12300) - 2359674..2360336 (+) 663 WP_000922488.1 YkyA family protein -
  FOC76_RS12305 (FOC76_12305) kre 2360368..2360826 (-) 459 WP_000804871.1 YkyB family protein Regulator
  FOC76_RS12310 (FOC76_12310) - 2361004..2362539 (+) 1536 WP_000658861.1 Ppx/GppA family phosphatase -
  FOC76_RS12315 (FOC76_12315) - 2362648..2364756 (+) 2109 WP_000423559.1 polyphosphate kinase -
  FOC76_RS12320 (FOC76_12320) - 2364931..2365167 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=449443 FOC76_RS12305 WP_000804871.1 2360368..2360826(-) (kre) [Bacillus tropicus strain FDAARGOS_782]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=449443 FOC76_RS12305 WP_000804871.1 2360368..2360826(-) (kre) [Bacillus tropicus strain FDAARGOS_782]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5