Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FOC76_RS11330 Genome accession   NZ_CP053955
Coordinates   2186800..2187594 (+) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus tropicus strain FDAARGOS_782     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2181800..2192594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC76_RS11315 (FOC76_11315) argR 2182639..2183088 (+) 450 WP_001032581.1 arginine repressor ArgR -
  FOC76_RS11320 (FOC76_11320) recN 2183356..2185095 (+) 1740 WP_000947747.1 DNA repair protein RecN Machinery gene
  FOC76_RS11325 (FOC76_11325) spoIVB 2185214..2186512 (+) 1299 WP_002022346.1 SpoIVB peptidase -
  FOC76_RS11330 (FOC76_11330) spo0A 2186800..2187594 (+) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  FOC76_RS11335 (FOC76_11335) - 2187760..2188731 (+) 972 WP_001058888.1 tyrosine-type recombinase/integrase -
  FOC76_RS11340 (FOC76_11340) - 2189716..2190543 (+) 828 WP_000931195.1 MerR family transcriptional regulator -
  FOC76_RS11345 (FOC76_11345) - 2190962..2191249 (+) 288 WP_000579933.1 helix-turn-helix transcriptional regulator -
  FOC76_RS11350 (FOC76_11350) - 2191246..2191473 (+) 228 WP_000163291.1 hypothetical protein -
  FOC76_RS11355 (FOC76_11355) - 2191466..2192149 (+) 684 WP_000472824.1 hypothetical protein -
  FOC76_RS11360 (FOC76_11360) - 2192149..2192292 (+) 144 WP_001200133.1 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=449441 FOC76_RS11330 WP_033686380.1 2186800..2187594(+) (spo0A) [Bacillus tropicus strain FDAARGOS_782]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=449441 FOC76_RS11330 WP_033686380.1 2186800..2187594(+) (spo0A) [Bacillus tropicus strain FDAARGOS_782]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGTCAAGAAGATGTGACGAAAAAAGCGGTTGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAATTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTACTTAAGAGAAGCAATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACAAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGTCGTGTCGAGCGTGCAATCC
GTCATGCAATTGAAGTAGCGTGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATTGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818