Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   GGS_RS09485 Genome accession   NC_018712
Coordinates   1947061..1947510 (-) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae subsp. equisimilis RE378     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1942061..1952510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GGS_RS09465 (GGS_1798) - 1942135..1942581 (-) 447 WP_042357999.1 dUTP diphosphatase -
  GGS_RS09470 (GGS_1799) - 1942689..1943456 (-) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  GGS_RS09475 (GGS_1800) - 1943575..1945359 (-) 1785 WP_015017435.1 ABC transporter ATP-binding protein -
  GGS_RS09480 (GGS_1801) rcrP 1945359..1947068 (-) 1710 WP_015017436.1 ABC transporter ATP-binding protein Regulator
  GGS_RS09485 (GGS_1802) rcrR 1947061..1947510 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  GGS_RS09490 (GGS_1803) - 1947711..1948727 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  GGS_RS09495 (GGS_1804) hasC 1948759..1949661 (+) 903 WP_003061497.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  GGS_RS09500 (GGS_1805) - 1949842..1950468 (+) 627 WP_012767578.1 DUF6198 family protein -
  GGS_RS09505 (GGS_1806) - 1950645..1951319 (-) 675 WP_003053389.1 rhomboid family intramembrane serine protease -
  GGS_RS09510 (GGS_1807) - 1951316..1951843 (-) 528 WP_012767579.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=44944 GGS_RS09485 WP_003053369.1 1947061..1947510(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=44944 GGS_RS09485 WP_003053369.1 1947061..1947510(-) (rcrR) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTTAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAGCTGCCTTTGTTGCA
AGAATGTCGCAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43