Detailed information NTG0449429

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FOC76_RS06350
• Genome accession: NZ_CP053955
• Coordinates: 1275400..1276749 (+)
• Length: 449 a.a.
• NCBI ID: WP_000457322.1
• Uniprot ID: -
• Organism: Bacillus tropicus strain FDAARGOS_782
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1270400..1281749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC76_RS06330 (FOC76_06330)	-	1271501..1272136 (-)	636	WP_000926681.1	YigZ family protein	-
FOC76_RS06335 (FOC76_06335)	-	1272376..1273218 (+)	843	WP_000844762.1	DegV family protein	-
FOC76_RS06340 (FOC76_06340)	-	1273392..1273706 (+)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FOC76_RS06345 (FOC76_06345)	-	1273854..1275272 (+)	1419	WP_000499504.1	NlpC/P60 family protein	-
FOC76_RS06350 (FOC76_06350)	comFA	1275400..1276749 (+)	1350	WP_000457322.1	ATP-dependent helicase ComFA	Machinery gene
FOC76_RS06355 (FOC76_06355)	-	1276749..1277453 (+)	705	WP_002022782.1	ComF family protein	-
FOC76_RS06360 (FOC76_06360)	cspC	1277580..1277777 (+)	198	WP_001990088.1	cold shock protein CspC	-
FOC76_RS06365 (FOC76_06365)	raiA	1278101..1278643 (+)	543	WP_000671191.1	ribosome-associated translation inhibitor RaiA	-
FOC76_RS06370 (FOC76_06370)	secA	1278918..1281425 (+)	2508	WP_000579383.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51135.57 Da
• Isoelectric Point: 9.1729

>NTDB_id=449429 FOC76_RS06350 WP_000457322.1 1275400..1276749(+) (comFA) [Bacillus tropicus strain FDAARGOS_782]
MFAGKQLLLEEISSDLRRELSDLKEKGEIVCVQGVIKRDSKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIHERKGERELNSLQWEGALATGQELAAQGVIEAIQQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVMELAPRLQEVFPSINVAALYGGSVDHEKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKGLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEDVSLLLKGLDNRIDGVHAEDPMRKEKVTSFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEVFSESALV
QIAGRAGRSFEEPCGEVMYFHYGKTEAMVRAKKHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=449429 FOC76_RS06350 WP_000457322.1 1275400..1276749(+) (comFA) [Bacillus tropicus strain FDAARGOS_782]
ATGTTTGCTGGGAAACAGTTGCTATTAGAAGAAATATCTTCAGACTTAAGGAGAGAATTAAGTGATTTAAAAGAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAATAAAGAGGGATTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGCGAAAGGGAATTAAATTCGTTACAGTGGGAAGGTGCATT
GGCTACTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCGATTCAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTAATGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCGGGAAGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAG
GCCTCCATCATAAAAAAATTCCTCGCGTATTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGATGTGAGTCTGTTATTGAAAGGGTTGGATAATCGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGACATCCTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCGGAAGAAGAAGTTTTTTCAGAGAGTGCTCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTGTGGCGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
GATGGTACGTGCGAAAAAACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTGATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.691	96.659	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	41.457	88.641	0.367