Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STAVA116_RS02440 Genome accession   NZ_CP065498
Coordinates   461208..462014 (+) Length   268 a.a.
NCBI ID   WP_087009734.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain AVA116     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 456208..467014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAVA116_RS02420 (STAVA116_02425) tuf 457257..458453 (+) 1197 WP_002949971.1 elongation factor Tu -
  STAVA116_RS02425 (STAVA116_02430) tpiA 458702..459460 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  STAVA116_RS02430 (STAVA116_02435) tmk 459698..460327 (+) 630 WP_002946312.1 dTMP kinase -
  STAVA116_RS02435 (STAVA116_02440) - 460336..461211 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  STAVA116_RS02440 (STAVA116_02445) yaaT 461208..462014 (+) 807 WP_087009734.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STAVA116_RS02445 (STAVA116_02450) yabA 462001..462321 (+) 321 WP_087009735.1 DNA replication initiation control protein YabA -
  STAVA116_RS02450 (STAVA116_02455) rsmI 462324..463190 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STAVA116_RS02455 (STAVA116_02460) - 463328..464563 (+) 1236 WP_087009736.1 ammonium transporter -
  STAVA116_RS02460 (STAVA116_02465) - 464574..464915 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  STAVA116_RS02465 (STAVA116_02470) - 465013..465669 (+) 657 WP_087009737.1 glycoside hydrolase family 73 protein -
  STAVA116_RS02470 (STAVA116_02475) - 465692..466513 (+) 822 WP_087009738.1 Cof-type HAD-IIB family hydrolase -
  STAVA116_RS02475 (STAVA116_02480) - 466532..467003 (-) 472 Protein_440 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29813.24 Da        Isoelectric Point: 4.6447

>NTDB_id=449337 STAVA116_RS02440 WP_087009734.1 461208..462014(+) (yaaT) [Streptococcus thermophilus strain AVA116]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKARYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFDKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=449337 STAVA116_RS02440 WP_087009734.1 461208..462014(+) (yaaT) [Streptococcus thermophilus strain AVA116]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTCGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGACAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414