Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   ST4067_RS07825 Genome accession   NZ_CP065496
Coordinates   1501065..1501868 (+) Length   267 a.a.
NCBI ID   WP_224103634.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4067     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496065..1506868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4067_RS07805 (ST4067_07820) - 1497418..1497684 (-) 267 WP_263604483.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  ST4067_RS09650 - 1497935..1498336 (-) 402 WP_311316656.1 hypothetical protein -
  ST4067_RS07810 (ST4067_07825) - 1498666..1498827 (-) 162 WP_263604484.1 hypothetical protein -
  ST4067_RS07815 (ST4067_07830) - 1499317..1499547 (-) 231 WP_011226494.1 bacteriocin class II family protein -
  ST4067_RS07820 (ST4067_07835) - 1499797..1500528 (+) 732 WP_180477148.1 LytR/AlgR family response regulator transcription factor -
  ST4067_RS07825 comD/blpH 1501065..1501868 (+) 804 WP_224103634.1 ATP-binding protein Regulator
  ST4067_RS07830 (ST4067_07845) - 1501886..1502047 (-) 162 WP_011226496.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  ST4067_RS07835 (ST4067_07850) comB 1502062..1503429 (-) 1368 WP_096811636.1 bacteriocin secretion accessory protein Regulator
  ST4067_RS07840 (ST4067_07855) - 1503445..1505599 (-) 2155 Protein_1492 peptide cleavage/export ABC transporter -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30835.17 Da        Isoelectric Point: 4.8309

>NTDB_id=449281 ST4067_RS07825 WP_224103634.1 1501065..1501868(+) (comD/blpH) [Streptococcus thermophilus strain 4067]
MYLENTTHSSTLELRKLCVVISLVLFFIMIVFLERNIREMIQGQLDFQKNLQLENLYTYNKHIECLYNSVRSFRHDYSNL
LVTLRLGIDKDDMDIVKEVYDSVLQESDKRLNTRNFDLARLVNIQDNTLKSLLSAKVLQAEEEGIEAQISIPEPIHLIGM
EILDFIIVTSIFLDNAIEGAIQTQNHKITISFWEDHRSQLLSISNTISEEQTETKTIFERGVSNKGRERGIGLANVTEIL
DNYINVNLETQSNNFSFTQQLTITKKA

Nucleotide


Download         Length: 804 bp        

>NTDB_id=449281 ST4067_RS07825 WP_224103634.1 1501065..1501868(+) (comD/blpH) [Streptococcus thermophilus strain 4067]
ATGTATCTTGAAAACACTACTCACTCTTCAACTTTGGAGCTTCGAAAACTCTGTGTTGTTATTTCACTTGTCCTCTTCTT
CATTATGATTGTCTTTTTAGAAAGAAACATTCGTGAAATGATTCAAGGACAATTGGACTTCCAGAAAAATCTCCAGCTAG
AGAATCTCTACACCTACAATAAACATATTGAATGTCTCTACAATTCTGTTCGTAGTTTTAGACACGATTATAGTAATCTC
TTAGTCACATTACGATTGGGGATAGATAAAGACGATATGGATATTGTCAAAGAAGTCTATGATAGTGTGCTTCAAGAATC
CGATAAACGATTAAATACAAGAAACTTTGACTTAGCTAGACTCGTTAATATTCAGGATAATACTTTGAAAAGCCTTCTGT
CCGCAAAAGTTTTACAAGCAGAAGAAGAAGGTATTGAAGCTCAGATTAGCATCCCAGAACCCATCCACTTGATTGGGATG
GAGATTCTGGACTTCATTATCGTCACTTCTATTTTTTTAGATAACGCTATTGAAGGTGCCATTCAAACTCAAAACCATAA
AATTACTATTAGCTTTTGGGAAGATCATCGTTCACAGCTATTATCTATTAGCAATACCATAAGTGAAGAACAAACAGAAA
CTAAAACCATATTTGAAAGAGGTGTCTCCAACAAGGGACGAGAGCGAGGCATTGGCCTTGCTAATGTCACAGAAATCTTA
GATAACTATATCAATGTAAACTTAGAAACACAGAGTAACAATTTCTCATTCACACAACAATTAACAATAACTAAAAAGGC
CTAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(160-263)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

38.189

95.131

0.363