Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ST4067_RS04575 Genome accession   NZ_CP065496
Coordinates   859588..859806 (+) Length   72 a.a.
NCBI ID   WP_011681105.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4067     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 854588..864806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4067_RS04555 (ST4067_04560) - 855227..856885 (-) 1659 WP_002948383.1 NFACT family protein -
  ST4067_RS04560 (ST4067_04565) - 857208..858020 (+) 813 WP_263604741.1 DUF6994 family protein -
  ST4067_RS04565 (ST4067_04570) - 858471..858956 (+) 486 WP_014607832.1 NUDIX hydrolase -
  ST4067_RS04570 (ST4067_04575) - 858960..859151 (+) 192 WP_011681104.1 hypothetical protein -
  ST4067_RS04575 prx 859588..859806 (+) 219 WP_011681105.1 hypothetical protein Regulator
  ST4067_RS04580 (ST4067_04580) - 860008..860676 (+) 669 WP_014621543.1 TraX family protein -
  ST4067_RS09680 (ST4067_04585) - 860680..860901 (+) 222 WP_224102972.1 conjugal transfer protein TraX -
  ST4067_RS04590 (ST4067_04590) - 860943..861491 (+) 549 WP_011225930.1 DJ-1 family glyoxalase III -
  ST4067_RS04595 (ST4067_04595) - 861548..861763 (-) 216 WP_011681107.1 hypothetical protein -
  ST4067_RS04600 (ST4067_04600) - 861762..862535 (+) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  ST4067_RS04605 (ST4067_04605) - 862554..863501 (+) 948 WP_024704100.1 dihydroorotate dehydrogenase -
  ST4067_RS04610 (ST4067_04610) cas1 863640..864530 (+) 891 WP_263604742.1 CRISPR-associated endonuclease Cas1 -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8147.18 Da        Isoelectric Point: 4.4665

>NTDB_id=449248 ST4067_RS04575 WP_011681105.1 859588..859806(+) (prx) [Streptococcus thermophilus strain 4067]
MNSIGKENNIILTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 219 bp        

>NTDB_id=449248 ST4067_RS04575 WP_011681105.1 859588..859806(+) (prx) [Streptococcus thermophilus strain 4067]
ATGAATAGCATAGGAAAGGAGAATAATATAATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAA
AGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACG
AAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

80.556

0.472
  prx Streptococcus pyogenes MGAS8232

57.627

81.944

0.472
  prx Streptococcus pyogenes MGAS315

55.932

81.944

0.458
  prx Streptococcus pyogenes MGAS315

55.172

80.556

0.444
  prx Streptococcus pyogenes MGAS315

73.81

58.333

0.431
  prx Streptococcus pyogenes MGAS315

65.909

61.111

0.403
  prx Streptococcus pyogenes MGAS315

68.293

56.944

0.389