Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FOC66_RS01155 Genome accession   NZ_CP053939
Coordinates   258651..259112 (-) Length   153 a.a.
NCBI ID   WP_003745830.1    Uniprot ID   -
Organism   Neisseria mucosa strain FDAARGOS_758     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 253651..264112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC66_RS01130 (FOC66_01130) - 254436..254996 (-) 561 WP_003745823.1 adenine phosphoribosyltransferase -
  FOC66_RS01135 (FOC66_01135) gmk 255165..255782 (+) 618 WP_003745825.1 guanylate kinase -
  FOC66_RS01140 (FOC66_01140) rpoZ 255835..256041 (+) 207 WP_003682294.1 DNA-directed RNA polymerase subunit omega -
  FOC66_RS01145 (FOC66_01145) - 256147..258303 (+) 2157 WP_003745827.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  FOC66_RS01150 (FOC66_01150) - 258414..258575 (-) 162 WP_003745829.1 hypothetical protein -
  FOC66_RS01155 (FOC66_01155) recX 258651..259112 (-) 462 WP_003745830.1 recombination regulator RecX Regulator
  FOC66_RS01160 (FOC66_01160) - 259210..259923 (-) 714 WP_003745832.1 phosphoglycolate phosphatase -
  FOC66_RS01165 (FOC66_01165) - 260345..261610 (+) 1266 WP_003745834.1 Glu/Leu/Phe/Val dehydrogenase -
  FOC66_RS01170 (FOC66_01170) - 261771..262589 (+) 819 WP_003745836.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
  FOC66_RS01175 (FOC66_01175) purN 262687..263313 (+) 627 WP_003745839.1 phosphoribosylglycinamide formyltransferase -
  FOC66_RS01180 (FOC66_01180) - 263344..264012 (+) 669 WP_036493544.1 DUF3108 domain-containing protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17914.11 Da        Isoelectric Point: 6.4984

>NTDB_id=449239 FOC66_RS01155 WP_003745830.1 258651..259112(-) (recX) [Neisseria mucosa strain FDAARGOS_758]
MRPPKTLRARALDILSRQEVSRVGLKRKLAPHAESEEELEKVLDEFAERNWQSDQRYAEAYIHSKSNRYGTLRLKQALAQ
QGIDADDCRELLPDREDELQTAISVLRKKFKQEAEDLKEKQKQARFLAYRGFGADTIQTALKTAWNEEEDFYQ

Nucleotide


Download         Length: 462 bp        

>NTDB_id=449239 FOC66_RS01155 WP_003745830.1 258651..259112(-) (recX) [Neisseria mucosa strain FDAARGOS_758]
ATGAGACCCCCTAAAACCTTACGTGCCCGCGCCTTGGATATTCTTTCCCGTCAAGAAGTCAGCCGCGTCGGTTTGAAACG
CAAACTGGCTCCGCACGCTGAAAGCGAAGAAGAATTGGAAAAGGTTTTGGACGAATTCGCCGAACGAAATTGGCAATCCG
ACCAACGTTACGCAGAAGCCTATATTCACAGCAAAAGCAACCGTTACGGCACGCTCCGCCTCAAACAAGCCTTGGCGCAA
CAAGGTATTGATGCGGATGACTGTCGAGAATTACTGCCCGACAGAGAGGACGAGCTGCAAACCGCCATTTCTGTTTTGCG
TAAAAAATTCAAGCAAGAAGCTGAAGATTTGAAAGAAAAACAAAAACAAGCGCGTTTCCTTGCGTATCGTGGCTTTGGTG
CAGACACCATTCAGACGGCCTTAAAAACCGCGTGGAATGAAGAAGAAGACTTCTATCAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

78.912

96.078

0.758