Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FOC88_RS20245 Genome accession   NZ_CP053934
Coordinates   3818817..3818993 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain FDAARGOS_794     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3813817..3823993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC88_RS20225 (FOC88_20220) - 3814597..3815343 (-) 747 WP_000966135.1 YjbA family protein -
  FOC88_RS20230 (FOC88_20225) - 3815487..3816275 (-) 789 WP_042511612.1 DUF2268 domain-containing protein -
  FOC88_RS20235 (FOC88_20230) fabF 3816382..3817620 (-) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  FOC88_RS20240 (FOC88_20235) fabH 3817652..3818584 (-) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  FOC88_RS20245 (FOC88_20240) comZ 3818817..3818993 (-) 177 WP_009879752.1 ComZ family protein Regulator
  FOC88_RS20250 (FOC88_20245) - 3819047..3819919 (-) 873 WP_033668777.1 NAD(P)-dependent oxidoreductase -
  FOC88_RS20255 (FOC88_20250) - 3819949..3820683 (-) 735 WP_000028701.1 hydrolase -
  FOC88_RS20260 (FOC88_20255) - 3820840..3821022 (+) 183 WP_001211116.1 YjzD family protein -
  FOC88_RS20265 (FOC88_20260) clpB 3821056..3823656 (-) 2601 WP_000365382.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=449169 FOC88_RS20245 WP_009879752.1 3818817..3818993(-) (comZ) [Bacillus thuringiensis strain FDAARGOS_794]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=449169 FOC88_RS20245 WP_009879752.1 3818817..3818993(-) (comZ) [Bacillus thuringiensis strain FDAARGOS_794]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586