Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FOC88_RS06450 Genome accession   NZ_CP053934
Coordinates   1111080..1111538 (-) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus thuringiensis strain FDAARGOS_794     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1106080..1116538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC88_RS06425 (FOC88_06425) - 1106194..1107735 (-) 1542 WP_042510889.1 MDR family MFS transporter -
  FOC88_RS06430 (FOC88_06430) - 1108160..1108660 (+) 501 WP_000708179.1 hypothetical protein -
  FOC88_RS06435 (FOC88_06435) - 1108692..1108925 (-) 234 WP_000939450.1 SPP1 phage holin family protein -
  FOC88_RS06440 (FOC88_06440) - 1109090..1109731 (+) 642 WP_000680829.1 diguanylate cyclase -
  FOC88_RS06445 (FOC88_06445) - 1110386..1111048 (+) 663 WP_000922490.1 YkyA family protein -
  FOC88_RS06450 (FOC88_06450) kre 1111080..1111538 (-) 459 WP_000804868.1 YkyB family protein Regulator
  FOC88_RS06455 (FOC88_06455) ppx 1111716..1113254 (+) 1539 WP_000658863.1 exopolyphosphatase -
  FOC88_RS06460 (FOC88_06460) - 1113363..1115471 (+) 2109 WP_000423561.1 polyphosphate kinase -
  FOC88_RS06465 (FOC88_06465) - 1115645..1115881 (-) 237 WP_000283747.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=449155 FOC88_RS06450 WP_000804868.1 1111080..1111538(-) (kre) [Bacillus thuringiensis strain FDAARGOS_794]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=449155 FOC88_RS06450 WP_000804868.1 1111080..1111538(-) (kre) [Bacillus thuringiensis strain FDAARGOS_794]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAAACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCAAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493