Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STCNRZ385_RS02600 Genome accession   NZ_CP065495
Coordinates   480292..481098 (+) Length   268 a.a.
NCBI ID   WP_101415551.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ385     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 475292..486098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ385_RS02580 (STCNRZ385_02575) tuf 476341..477537 (+) 1197 WP_002949971.1 elongation factor Tu -
  STCNRZ385_RS02585 (STCNRZ385_02580) tpiA 477786..478544 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  STCNRZ385_RS02590 (STCNRZ385_02585) tmk 478782..479411 (+) 630 WP_014608059.1 dTMP kinase -
  STCNRZ385_RS02595 (STCNRZ385_02590) - 479420..480295 (+) 876 WP_014727360.1 DNA polymerase III subunit delta' -
  STCNRZ385_RS02600 (STCNRZ385_02595) yaaT 480292..481098 (+) 807 WP_101415551.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STCNRZ385_RS02605 (STCNRZ385_02600) yabA 481085..481405 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  STCNRZ385_RS02610 (STCNRZ385_02605) rsmI 481408..482274 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STCNRZ385_RS02615 (STCNRZ385_02610) - 482412..483647 (+) 1236 WP_100262222.1 ammonium transporter -
  STCNRZ385_RS02620 (STCNRZ385_02615) - 483658..483999 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  STCNRZ385_RS02625 (STCNRZ385_02620) - 484097..484753 (+) 657 WP_084828554.1 glycoside hydrolase family 73 protein -
  STCNRZ385_RS02630 (STCNRZ385_02625) - 484776..485597 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  STCNRZ385_RS02635 (STCNRZ385_02630) - 485616..486087 (-) 472 Protein_456 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29857.30 Da        Isoelectric Point: 4.6494

>NTDB_id=449130 STCNRZ385_RS02600 WP_101415551.1 480292..481098(+) (yaaT) [Streptococcus thermophilus strain CNRZ385]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMRVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=449130 STCNRZ385_RS02600 WP_101415551.1 480292..481098(+) (yaaT) [Streptococcus thermophilus strain CNRZ385]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCCGTGGATTTGAATAGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGAGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTATC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414