Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FOC91_RS16295 Genome accession   NZ_CP053931
Coordinates   2897382..2898176 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain FDAARGOS_797     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2892382..2903176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC91_RS16280 (FOC91_16280) argR 2893221..2893670 (+) 450 WP_001032581.1 arginine repressor ArgR -
  FOC91_RS16285 (FOC91_16285) recN 2893938..2895677 (+) 1740 WP_000947754.1 DNA repair protein RecN Machinery gene
  FOC91_RS16290 (FOC91_16290) spoIVB 2895796..2897094 (+) 1299 WP_002054681.1 SpoIVB peptidase -
  FOC91_RS16295 (FOC91_16295) spo0A 2897382..2898176 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  FOC91_RS16300 (FOC91_16300) - 2898474..2900000 (+) 1527 WP_042510872.1 glycosyltransferase family 39 protein -
  FOC91_RS16305 (FOC91_16305) - 2900168..2900314 (-) 147 WP_001247671.1 YycC family protein -
  FOC91_RS16310 (FOC91_16310) - 2900365..2901093 (+) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  FOC91_RS16315 (FOC91_16315) - 2901142..2901375 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=449128 FOC91_RS16295 WP_003161566.1 2897382..2898176(+) (spo0A) [Bacillus cereus strain FDAARGOS_797]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=449128 FOC91_RS16295 WP_003161566.1 2897382..2898176(+) (spo0A) [Bacillus cereus strain FDAARGOS_797]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGACATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCCGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818