Detailed information NTG0044912

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: GGS_RS06120
• Genome accession: NC_018712
• Coordinates: 1223521..1225728 (-)
• Length: 735 a.a.
• NCBI ID: WP_003062521.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis RE378
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1218521..1230728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGS_RS06090 (GGS_1157)	-	1218917..1219738 (-)	822	WP_015017116.1	ZIP family metal transporter	-
GGS_RS06095 (GGS_1158)	-	1219756..1220544 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
GGS_RS06100 (GGS_1159)	-	1220534..1221220 (-)	687	WP_003054660.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
GGS_RS06105 (GGS_1160)	nth	1221301..1221957 (-)	657	WP_003054655.1	endonuclease III	-
GGS_RS06110 (GGS_1161)	-	1221954..1222637 (-)	684	WP_003054653.1	DnaD domain-containing protein	-
GGS_RS06115 (GGS_1162)	-	1222855..1223373 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
GGS_RS06120 (GGS_1163)	recJ	1223521..1225728 (-)	2208	WP_003062521.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
GGS_RS06125 (GGS_1164)	-	1225725..1226489 (-)	765	WP_015017117.1	SDR family oxidoreductase	-
GGS_RS06130 (GGS_1165)	rnz	1226489..1227418 (-)	930	WP_003054662.1	ribonuclease Z	-
GGS_RS06135 (GGS_1166)	-	1227433..1228068 (-)	636	WP_012767138.1	cystathionine beta-lyase	-
GGS_RS06140 (GGS_1167)	hflX	1228061..1229299 (-)	1239	WP_015057674.1	GTPase HflX	-
GGS_RS06145 (GGS_1168)	miaA	1229387..1230271 (-)	885	WP_003057843.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
GGS_RS10485	-	1230404..1230580 (+)	177	WP_012767140.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82133.03 Da
• Isoelectric Point: 4.7200

>NTDB_id=44912 GGS_RS06120 WP_003062521.1 1223521..1225728(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLMGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGVTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=44912 GGS_RS06120 WP_003062521.1 1223521..1225728(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCACCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGATGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGGTGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ACTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• RecJ OB domain (RecJ_OB) (450-556)

• DHHA1 domain (DHHA1) (317-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.649	100	0.641
recJ	Bacillus subtilis subsp. subtilis str. 168	36.108	100	0.384