Detailed information NTG0449115

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FOC91_RS11125
• Genome accession: NZ_CP053931
• Coordinates: 1953913..1955262 (+)
• Length: 449 a.a.
• NCBI ID: WP_042513388.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FDAARGOS_797
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1948913..1960262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC91_RS11105 (FOC91_11105)	-	1950016..1950651 (-)	636	WP_000926685.1	YigZ family protein	-
FOC91_RS11110 (FOC91_11110)	-	1950891..1951733 (+)	843	WP_000844766.1	DegV family protein	-
FOC91_RS11115 (FOC91_11115)	-	1951907..1952221 (+)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FOC91_RS11120 (FOC91_11120)	-	1952475..1953785 (+)	1311	WP_042513387.1	NlpC/P60 family protein	-
FOC91_RS11125 (FOC91_11125)	comFA	1953913..1955262 (+)	1350	WP_042513388.1	ATP-dependent helicase ComFA	Machinery gene
FOC91_RS11130 (FOC91_11130)	comFC	1955262..1955966 (+)	705	WP_041184339.1	comF operon protein ComFC	-
FOC91_RS11135 (FOC91_11135)	cspC	1956093..1956290 (+)	198	WP_001990088.1	cold shock protein CspC	-
FOC91_RS11140 (FOC91_11140)	raiA	1956614..1957156 (+)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
FOC91_RS11145 (FOC91_11145)	secA	1957433..1959940 (+)	2508	WP_000579383.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51377.10 Da
• Isoelectric Point: 9.7782

>NTDB_id=449115 FOC91_RS11125 WP_042513388.1 1953913..1955262(+) (comFA) [Bacillus cereus strain FDAARGOS_797]
MVAGKQLLLEELSSDLRRELSDSKKKGEIICVQGVIKKAFKYICQRCGNIEQRLFASFLCKRCNKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVFYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=449115 FOC91_RS11125 WP_042513388.1 1953913..1955262(+) (comFA) [Bacillus cereus strain FDAARGOS_797]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTCGAAAAAGAAGGG
AGAGATCATATGTGTACAAGGTGTAATAAAGAAGGCTTTTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAATAAAGTATGTACGTATTGCCGCAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGTGGGATTCACGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCCGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAGGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTTTTTATTTTCACTACGGCAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.843	96.659	0.501
comFA	Latilactobacillus sakei subsp. sakei 23K	40.75	89.087	0.363