Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GGS_RS06055 Genome accession   NC_018712
Coordinates   1213155..1213634 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis RE378     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1208155..1218634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GGS_RS06040 (GGS_1148) - 1208972..1210624 (+) 1653 WP_003059818.1 NFACT family protein -
  GGS_RS06045 (GGS_1149) - 1210687..1211934 (-) 1248 WP_042357937.1 CDC27 family protein -
  GGS_RS06050 (GGS_1150) - 1211924..1213106 (-) 1183 Protein_1153 AI-2E family transporter -
  GGS_RS06055 (GGS_1151) mutX 1213155..1213634 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  GGS_RS06060 - 1213830..1214021 (+) 192 WP_003058922.1 hypothetical protein -
  GGS_RS10675 (GGS_1152) - 1214109..1214477 (-) 369 WP_227985721.1 CPBP family intramembrane glutamic endopeptidase -
  GGS_RS10955 - 1214440..1214805 (-) 366 WP_003060933.1 hypothetical protein -
  GGS_RS06070 (GGS_1153) rfbB 1214994..1216037 (-) 1044 WP_003057682.1 dTDP-glucose 4,6-dehydratase -
  GGS_RS06075 (GGS_1154) - 1216281..1216874 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  GGS_RS06080 (GGS_1155) rfbA 1216874..1217743 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=44911 GGS_RS06055 WP_003058929.1 1213155..1213634(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=44911 GGS_RS06055 WP_003058929.1 1213155..1213634(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686

Multiple sequence alignment