Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinR   Type   Regulator
Locus tag   FOC91_RS03005 Genome accession   NZ_CP053931
Coordinates   340780..341103 (+) Length   107 a.a.
NCBI ID   WP_000578878.1    Uniprot ID   A0A6L7H7A6
Organism   Bacillus cereus strain FDAARGOS_797     
Function   repression of rok; repression of degU; repression of spo0A (predicted from homology)   
Competence regulation

Genomic Context

Location: 335780..346103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC91_RS02990 (FOC91_02990) - 336296..337663 (-) 1368 WP_042513058.1 aldehyde dehydrogenase -
  FOC91_RS02995 (FOC91_02995) inhA1 337835..340222 (-) 2388 WP_001035926.1 M6 family metalloprotease immune inhibitor InhA1 -
  FOC91_RS03000 (FOC91_03000) - 340566..340700 (+) 135 WP_000276214.1 anti-repressor SinI family protein -
  FOC91_RS03005 (FOC91_03005) sinR 340780..341103 (+) 324 WP_000578878.1 helix-turn-helix domain-containing protein Regulator
  FOC91_RS03010 (FOC91_03010) calY 341182..341775 (-) 594 WP_000053735.1 biofilm matrix protein CalY -
  FOC91_RS03015 (FOC91_03015) - 342200..343003 (-) 804 WP_042513059.1 DUF4047 domain-containing protein -
  FOC91_RS03020 (FOC91_03020) - 343165..343752 (-) 588 WP_000172840.1 CalY family protein -
  FOC91_RS03025 (FOC91_03025) sipW 343815..344384 (-) 570 WP_000767813.1 signal peptidase I SipW -
  FOC91_RS03030 (FOC91_03030) - 344579..345865 (-) 1287 WP_042513060.1 D-alanyl-D-alanine carboxypeptidase family protein -

Sequence

Protein


Download         Length: 107 a.a.        Molecular weight: 12319.17 Da        Isoelectric Point: 9.6244

>NTDB_id=449093 FOC91_RS03005 WP_000578878.1 340780..341103(+) (sinR) [Bacillus cereus strain FDAARGOS_797]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK

Nucleotide


Download         Length: 324 bp        

>NTDB_id=449093 FOC91_RS03005 WP_000578878.1 340780..341103(+) (sinR) [Bacillus cereus strain FDAARGOS_797]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA

Domains

Predicted by InterproScan.

Anti-repressor SinI (SinI)

(72-99)

Helix-turn-helix (HTH_3)

(6-60)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L7H7A6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinR Bacillus subtilis subsp. subtilis str. 168

67.89

100

0.692