Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HP062_RS18925 Genome accession   NZ_CP053929
Coordinates   4128098..4128502 (-) Length   134 a.a.
NCBI ID   WP_010466861.1    Uniprot ID   -
Organism   Pseudomonas sp. B14-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4123098..4133502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HP062_RS18910 (HP062_18910) - 4124920..4126977 (-) 2058 WP_010466865.1 methyl-accepting chemotaxis protein -
  HP062_RS18915 (HP062_18915) - 4127125..4127664 (-) 540 WP_010466863.1 chemotaxis protein CheW -
  HP062_RS18920 (HP062_18920) pilH 4127675..4128040 (-) 366 WP_008068134.1 twitching motility response regulator PilH -
  HP062_RS18925 (HP062_18925) pilG 4128098..4128502 (-) 405 WP_010466861.1 twitching motility response regulator PilG Regulator
  HP062_RS18930 (HP062_18930) gshB 4128738..4129709 (+) 972 WP_077747230.1 glutathione synthase -
  HP062_RS18935 (HP062_18935) - 4129816..4130715 (+) 900 WP_083375545.1 energy transducer TonB -
  HP062_RS18940 (HP062_18940) - 4130931..4131503 (+) 573 WP_077747229.1 YqgE/AlgH family protein -
  HP062_RS18945 (HP062_18945) ruvX 4131503..4131940 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  HP062_RS18950 (HP062_18950) pyrR 4132021..4132524 (+) 504 WP_010466851.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14613.03 Da        Isoelectric Point: 7.3230

>NTDB_id=449079 HP062_RS18925 WP_010466861.1 4128098..4128502(-) (pilG) [Pseudomonas sp. B14-6]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNHSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=449079 HP062_RS18925 WP_010466861.1 4128098..4128502(-) (pilG) [Pseudomonas sp. B14-6]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGTACCGCCGAAACGCTGTT
GAAAAACGTGGGTTGTGAAGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGATAACCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACCACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709