Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   GGS_RS05015 Genome accession   NC_018712
Coordinates   1006275..1006940 (-) Length   221 a.a.
NCBI ID   WP_003060151.1    Uniprot ID   A0A9X9QR18
Organism   Streptococcus dysgalactiae subsp. equisimilis RE378     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1001275..1011940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GGS_RS04995 (GGS_0952) - 1001601..1002599 (-) 999 WP_015017006.1 polyprenyl synthetase family protein -
  GGS_RS05000 (GGS_0953) - 1002678..1004570 (-) 1893 WP_015017007.1 NAD(P)/FAD-dependent oxidoreductase -
  GGS_RS05005 (GGS_0954) - 1004730..1005272 (+) 543 WP_003060963.1 Gx transporter family protein -
  GGS_RS05010 (GGS_0955) - 1005331..1006278 (-) 948 WP_015017008.1 sensor histidine kinase -
  GGS_RS05015 (GGS_0956) braR 1006275..1006940 (-) 666 WP_003060151.1 response regulator transcription factor Regulator
  GGS_RS05020 (GGS_0957) - 1006984..1008939 (-) 1956 WP_003057528.1 ABC transporter permease -
  GGS_RS05025 (GGS_0958) - 1008941..1009693 (-) 753 WP_042357908.1 ABC transporter ATP-binding protein -
  GGS_RS05030 (GGS_0959) - 1009730..1010695 (-) 966 WP_003057518.1 S41 family peptidase -
  GGS_RS05035 (GGS_0960) - 1010861..1011343 (+) 483 WP_015017010.1 PASTA domain-containing protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25638.37 Da        Isoelectric Point: 5.7900

>NTDB_id=44905 GGS_RS05015 WP_003060151.1 1006275..1006940(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MTKHDKIYIIEDDETILTLLHNHLSQSYDVKTVTNFRDIKQEVLAYQPDLILMDITLPFFNGFYWTTEIRKHLTIPIIFI
SSSNDEMDTVMALNMGGDDFVSKPFSLTILDAKIAAFLRRAQQFTSDDISLDQFKLHFDGTFSNGNEAVTLSPTEHKILT
ILMTRHQEIVSKEEILERLWENDNFIDHNTLNVNMTRLRKKIATIGFDRIHTIRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=44905 GGS_RS05015 WP_003060151.1 1006275..1006940(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGACAAAACATGATAAAATCTATATTATTGAAGATGATGAGACCATTTTAACCCTTCTTCACAATCACCTTAGCCAATC
TTATGATGTTAAGACGGTCACTAACTTTAGGGATATTAAACAGGAGGTACTTGCCTACCAGCCAGACCTTATCTTAATGG
ATATTACCCTACCTTTTTTCAATGGTTTTTACTGGACCACTGAAATTCGAAAACACTTAACGATTCCTATCATTTTTATT
TCCAGTAGTAATGATGAGATGGATACCGTTATGGCTCTTAATATGGGGGGAGATGACTTTGTCTCGAAACCTTTTTCGCT
AACCATTTTAGATGCTAAAATAGCAGCCTTTTTACGGCGTGCACAACAATTTACTAGTGACGACATTAGTCTCGATCAGT
TTAAACTCCATTTTGACGGTACCTTTTCAAATGGGAACGAAGCCGTTACCTTATCACCAACCGAACATAAAATCCTAACC
ATTTTAATGACTAGACATCAAGAAATTGTTTCTAAGGAAGAAATCTTGGAAAGACTTTGGGAAAATGATAATTTTATTGA
TCACAATACCCTGAATGTCAATATGACACGTCTACGCAAAAAAATTGCAACTATTGGTTTTGATCGTATTCATACTATAA
GAGGAGTGGGGTATCTCGTTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9X9QR18

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.909

99.548

0.457


Multiple sequence alignment