Detailed information NTG0044904

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: GGS_RS04970
• Genome accession: NC_018712
• Coordinates: 997283..998353 (+)
• Length: 356 a.a.
• NCBI ID: WP_012766932.1
• Uniprot ID: A0A9X9GBX6
• Organism: Streptococcus dysgalactiae subsp. equisimilis RE378
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 992283..1003353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGS_RS11005	-	993683..993859 (+)	177	WP_003058317.1	hypothetical protein	-
GGS_RS04950	-	993820..994152 (+)	333	WP_003058321.1	hypothetical protein	-
GGS_RS04955	-	994172..994876 (+)	705	WP_015057555.1	FAD-binding oxidoreductase	-
GGS_RS04960 (GGS_0945)	-	995023..995715 (-)	693	WP_003058325.1	helix-turn-helix transcriptional regulator	-
GGS_RS04965 (GGS_0946)	-	995890..996915 (+)	1026	WP_003058343.1	Gfo/Idh/MocA family oxidoreductase	-
GGS_RS04970 (GGS_0947)	xerS	997283..998353 (+)	1071	WP_012766932.1	tyrosine recombinase XerS	Machinery gene
GGS_RS04975 (GGS_0948)	-	998430..998870 (+)	441	WP_015017003.1	NusG domain II-containing protein	-
GGS_RS04980 (GGS_0949)	-	998941..999891 (-)	951	WP_012766934.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GGS_RS04985 (GGS_0950)	-	999881..1000933 (-)	1053	WP_042357907.1	FAD:protein FMN transferase	-
GGS_RS04990 (GGS_0951)	-	1001004..1001510 (-)	507	WP_042358052.1	FMN-binding protein	-
GGS_RS04995 (GGS_0952)	-	1001601..1002599 (-)	999	WP_015017006.1	polyprenyl synthetase family protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41385.62 Da
• Isoelectric Point: 9.5512

>NTDB_id=44904 GGS_RS04970 WP_012766932.1 997283..998353(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=44904 GGS_RS04970 WP_012766932.1 997283..998353(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGAGACGTGATTTATTACTCGAAAAAATAGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGAGTCCCTAATCGCATGGACGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCTCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCACAGGTTTTGGTTAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (181-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A9X9GBX6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806