Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BMWSH_RS21665 Genome accession   NC_017138
Coordinates   4314409..4314603 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium WSH-002     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4309409..4319603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMWSH_RS21640 (BMWSH_4556) - 4309576..4310598 (-) 1023 WP_014461592.1 ABC transporter ATP-binding protein -
  BMWSH_RS21645 (BMWSH_4557) - 4310824..4311597 (-) 774 WP_014461593.1 DUF2268 domain-containing protein -
  BMWSH_RS21650 (BMWSH_4558) fabF 4311704..4312945 (-) 1242 WP_014461594.1 beta-ketoacyl-ACP synthase II -
  BMWSH_RS21655 (BMWSH_4559) - 4312985..4313923 (-) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  BMWSH_RS21660 (BMWSH_4560) - 4314180..4314380 (+) 201 WP_014461595.1 hypothetical protein -
  BMWSH_RS21665 (BMWSH_4561) comZ 4314409..4314603 (-) 195 WP_013081746.1 ComZ family protein Regulator
  BMWSH_RS21670 (BMWSH_4562) - 4314681..4315565 (-) 885 WP_014461596.1 NAD(P)-dependent oxidoreductase -
  BMWSH_RS21675 (BMWSH_4563) - 4315748..4316488 (-) 741 WP_013055401.1 hypothetical protein -
  BMWSH_RS21680 (BMWSH_4564) - 4316698..4316886 (+) 189 WP_013055400.1 YjzD family protein -
  BMWSH_RS21685 (BMWSH_4565) - 4317089..4317973 (+) 885 WP_014461597.1 NAD(P)-dependent oxidoreductase -
  BMWSH_RS21690 (BMWSH_4566) galT 4318016..4319539 (-) 1524 WP_014461598.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=44886 BMWSH_RS21665 WP_013081746.1 4314409..4314603(-) (comZ) [Priestia megaterium WSH-002]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=44886 BMWSH_RS21665 WP_013081746.1 4314409..4314603(-) (comZ) [Priestia megaterium WSH-002]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACATGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment