Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STCNRZ1575_RS05485 Genome accession   NZ_CP065490
Coordinates   1027289..1027771 (-) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1575     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1022289..1032771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1575_RS05465 (STCNRZ1575_05460) - 1022874..1024123 (+) 1250 Protein_1007 ISL3 family transposase -
  STCNRZ1575_RS05470 (STCNRZ1575_05465) lepB 1024201..1024758 (-) 558 WP_011681191.1 signal peptidase I -
  STCNRZ1575_RS05475 (STCNRZ1575_05470) - 1024881..1026110 (-) 1230 WP_207559921.1 tetratricopeptide repeat protein -
  STCNRZ1575_RS05480 (STCNRZ1575_05475) - 1026100..1027278 (-) 1179 WP_232977173.1 AI-2E family transporter -
  STCNRZ1575_RS05485 (STCNRZ1575_05480) mutX 1027289..1027771 (-) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  STCNRZ1575_RS05490 (STCNRZ1575_05485) ftsX 1027927..1028856 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STCNRZ1575_RS05495 (STCNRZ1575_05490) ftsE 1028849..1029541 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STCNRZ1575_RS05505 (STCNRZ1575_05500) queG 1030780..1031898 (-) 1119 WP_260214305.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=448735 STCNRZ1575_RS05485 WP_011681193.1 1027289..1027771(-) (mutX) [Streptococcus thermophilus strain CNRZ1575]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=448735 STCNRZ1575_RS05485 WP_011681193.1 1027289..1027771(-) (mutX) [Streptococcus thermophilus strain CNRZ1575]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706