Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   BMWSH_RS09795 Genome accession   NC_017138
Coordinates   1888727..1889677 (+) Length   316 a.a.
NCBI ID   WP_014459287.1    Uniprot ID   A0A8D3WZD5
Organism   Priestia megaterium WSH-002     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1883727..1894677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMWSH_RS09770 (BMWSH_1975) lepB 1883920..1884453 (+) 534 WP_042992038.1 signal peptidase I -
  BMWSH_RS09775 (BMWSH_1976) - 1884687..1885250 (+) 564 WP_014459283.1 NAD(P)H-dependent oxidoreductase -
  BMWSH_RS09780 (BMWSH_1979) - 1885814..1885999 (+) 186 WP_014459286.1 hypothetical protein -
  BMWSH_RS26980 (BMWSH_1980) - 1886491..1886655 (+) 165 WP_013057894.1 hypothetical protein -
  BMWSH_RS09785 (BMWSH_1981) - 1886737..1886991 (-) 255 WP_013057893.1 hypothetical protein -
  BMWSH_RS09790 (BMWSH_1982) - 1887354..1888160 (+) 807 WP_013057892.1 cell wall hydrolase -
  BMWSH_RS09795 (BMWSH_1983) ceuB 1888727..1889677 (+) 951 WP_014459287.1 ABC transporter permease Machinery gene
  BMWSH_RS09800 (BMWSH_1984) - 1889670..1890617 (+) 948 WP_014459288.1 iron chelate uptake ABC transporter family permease subunit -
  BMWSH_RS09805 - 1890611..1891369 (+) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  BMWSH_RS09810 - 1891393..1892349 (+) 957 WP_042992040.1 siderophore ABC transporter substrate-binding protein -
  BMWSH_RS25955 (BMWSH_1985) - 1892386..1892658 (+) 273 Protein_2006 manganese catalase family protein -
  BMWSH_RS26985 (BMWSH_1986) - 1892912..1893052 (+) 141 WP_014459290.1 hypothetical protein -
  BMWSH_RS09825 (BMWSH_1987) - 1893521..1894600 (-) 1080 WP_042992043.1 PrsW family intramembrane metalloprotease -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34993.27 Da        Isoelectric Point: 9.9188

>NTDB_id=44871 BMWSH_RS09795 WP_014459287.1 1888727..1889677(+) (ceuB) [Priestia megaterium WSH-002]
MKFYQLILVFAVLAVLSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIVAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=44871 BMWSH_RS09795 WP_014459287.1 1888727..1889677(+) (ceuB) [Priestia megaterium WSH-002]
TTGAAGTTTTATCAGTTAATTCTTGTATTTGCTGTACTAGCGGTTTTGTCTCTTTTTGTGGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACAATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCGTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGATTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAGTCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGTG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTAATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.145

95.886

0.5


Multiple sequence alignment