Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BMWSH_RS03880 | Genome accession | NC_017138 |
| Coordinates | 761830..762882 (+) | Length | 350 a.a. |
| NCBI ID | WP_013059177.1 | Uniprot ID | A0A8D4BHW7 |
| Organism | Priestia megaterium WSH-002 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 756830..767882
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMWSH_RS03845 (BMWSH_0733) | - | 757396..757602 (+) | 207 | WP_013059184.1 | YqgQ family protein | - |
| BMWSH_RS03850 (BMWSH_0734) | - | 757605..758573 (+) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| BMWSH_RS27240 (BMWSH_0735) | - | 758685..759059 (+) | 375 | WP_014458223.1 | M14 family zinc carboxypeptidase | - |
| BMWSH_RS27245 (BMWSH_0736) | - | 759172..759588 (+) | 417 | WP_258523685.1 | M14 family zinc carboxypeptidase | - |
| BMWSH_RS25820 (BMWSH_0737) | - | 759624..759800 (-) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| BMWSH_RS03865 (BMWSH_0738) | - | 760009..760641 (+) | 633 | WP_014458225.1 | MBL fold metallo-hydrolase | - |
| BMWSH_RS03870 (BMWSH_0739) | - | 760679..760915 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| BMWSH_RS03875 (BMWSH_0740) | - | 761177..761560 (+) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BMWSH_RS03880 (BMWSH_0742) | comGA | 761830..762882 (+) | 1053 | WP_013059177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BMWSH_RS03885 (BMWSH_0743) | comGB | 762873..763919 (+) | 1047 | WP_014458228.1 | competence type IV pilus assembly protein ComGB | - |
| BMWSH_RS03890 (BMWSH_0744) | comGC | 763933..764244 (+) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| BMWSH_RS03895 (BMWSH_0745) | comGD | 764186..764668 (+) | 483 | WP_226554895.1 | competence type IV pilus minor pilin ComGD | - |
| BMWSH_RS03900 (BMWSH_0746) | - | 764652..764990 (+) | 339 | WP_028411610.1 | type II secretion system protein | - |
| BMWSH_RS03905 (BMWSH_0747) | comGF | 764987..765424 (+) | 438 | WP_014458231.1 | competence type IV pilus minor pilin ComGF | - |
| BMWSH_RS03910 (BMWSH_0748) | comGG | 765414..765788 (+) | 375 | WP_013059171.1 | competence type IV pilus minor pilin ComGG | - |
| BMWSH_RS03915 (BMWSH_0749) | - | 765832..766017 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| BMWSH_RS03920 (BMWSH_0750) | - | 766041..766865 (-) | 825 | WP_014458232.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39625.02 Da Isoelectric Point: 9.0586
>NTDB_id=44861 BMWSH_RS03880 WP_013059177.1 761830..762882(+) (comGA) [Priestia megaterium WSH-002]
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=44861 BMWSH_RS03880 WP_013059177.1 761830..762882(+) (comGA) [Priestia megaterium WSH-002]
TTGACCGAAATTGAACAGTTTGCAACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTACGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCGAAGGAAATGTCTG
AACGGCTCATTTCACATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCACTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCGGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCATCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGATATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTAAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGTGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCAGCTTGTAAAAAGATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGTTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCAACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTACGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCGAAGGAAATGTCTG
AACGGCTCATTTCACATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCACTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCGGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCATCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGATATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTAAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGTGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCAGCTTGTAAAAAGATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGTTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |