Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STAVA1121_RS05410 Genome accession   NZ_CP065488
Coordinates   1004585..1005067 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain AVA1121     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 999585..1010067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAVA1121_RS05390 (STAVA1121_05320) pepT 1000065..1001288 (-) 1224 WP_087009962.1 peptidase T -
  STAVA1121_RS05395 (STAVA1121_05325) lepB 1001497..1002054 (-) 558 WP_002953084.1 signal peptidase I -
  STAVA1121_RS05400 (STAVA1121_05330) - 1002177..1003406 (-) 1230 WP_180478533.1 tetratricopeptide repeat protein -
  STAVA1121_RS05405 (STAVA1121_05335) - 1003396..1004574 (-) 1179 WP_347131077.1 AI-2E family transporter -
  STAVA1121_RS05410 (STAVA1121_05340) mutX 1004585..1005067 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  STAVA1121_RS05415 (STAVA1121_05345) ftsX 1005223..1006152 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STAVA1121_RS05420 (STAVA1121_05350) ftsE 1006145..1006837 (-) 693 WP_347131078.1 cell division ATP-binding protein FtsE -
  STAVA1121_RS05430 (STAVA1121_05360) queG 1008076..1009194 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=448529 STAVA1121_RS05410 WP_011226072.1 1004585..1005067(-) (mutX) [Streptococcus thermophilus strain AVA1121]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=448529 STAVA1121_RS05410 WP_011226072.1 1004585..1005067(-) (mutX) [Streptococcus thermophilus strain AVA1121]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706