Detailed information NTG0044835

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A911_RS05665
• Genome accession: NC_018709
• Coordinates: 1081275..1082234 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni subsp. jejuni PT14
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076275..1087234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A911_RS05640 (A911_05535)	neuC	1076840..1077955 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
A911_RS08950	-	1077952..1078866 (+)	915	Protein_1080	beta-1,4-N-acetylgalactosaminyltransferase	-
A911_RS08955	-	1078900..1079562 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
A911_RS05655 (A911_05550)	-	1079557..1080408 (-)	852	WP_043020460.1	glycosyltransferase	-
A911_RS05660 (A911_05555)	waaV	1080392..1081216 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
A911_RS05665 (A911_05560)	waaF	1081275..1082234 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
A911_RS05670 (A911_05565)	gmhA	1082215..1082775 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
A911_RS05675 (A911_05570)	rfaE1	1082772..1084157 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A911_RS05680 (A911_05575)	rfaD	1084150..1085103 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
A911_RS05685 (A911_05580)	gmhB	1085104..1085664 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A911_RS05690 (A911_05585)	-	1085746..1086048 (+)	303	WP_002852762.1	cytochrome c	-
A911_RS05695 (A911_05590)	ccoS	1086071..1086277 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=44835 A911_RS05665 WP_002875425.1 1081275..1082234(+) (waaF) [Campylobacter jejuni subsp. jejuni PT14]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=44835 A911_RS05665 WP_002875425.1 1081275..1082234(+) (waaF) [Campylobacter jejuni subsp. jejuni PT14]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1