Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STMM20_RS04650 Genome accession   NZ_CP065485
Coordinates   901473..901955 (+) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM20     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 896473..906955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM20_RS04630 (STMM20_04625) queG 897346..898464 (+) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -
  STMM20_RS04635 (STMM20_04630) prfB 898517..899615 (+) 1099 WP_148263167.1 peptide chain release factor 2 -
  STMM20_RS04640 (STMM20_04635) ftsE 899703..900395 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STMM20_RS04645 (STMM20_04640) ftsX 900388..901317 (+) 930 WP_347103675.1 permease-like cell division protein FtsX -
  STMM20_RS04650 (STMM20_04645) mutX 901473..901955 (+) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  STMM20_RS04655 (STMM20_04650) - 901966..903144 (+) 1179 WP_024704144.1 AI-2E family transporter -
  STMM20_RS04660 (STMM20_04655) - 903134..904363 (+) 1230 WP_064355902.1 tetratricopeptide repeat protein -
  STMM20_RS04665 (STMM20_04660) lepB 904486..905043 (+) 558 WP_014621656.1 signal peptidase I -
  STMM20_RS04670 (STMM20_04665) pepT 905250..906473 (+) 1224 WP_014621655.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=448226 STMM20_RS04650 WP_011681193.1 901473..901955(+) (mutX) [Streptococcus thermophilus strain MM20]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=448226 STMM20_RS04650 WP_011681193.1 901473..901955(+) (mutX) [Streptococcus thermophilus strain MM20]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706