Detailed information NTG0448156

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CUP3940_RS07725
• Genome accession: NZ_CP053849
• Coordinates: 1499801..1500988 (+)
• Length: 395 a.a.
• NCBI ID: WP_176318644.1
• Uniprot ID: -
• Organism: Campylobacter upsaliensis RM3940
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1494801..1505988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CUP3940_RS07690 (CUP3940_1501)	recO	1495345..1495959 (-)	615	WP_039882835.1	recombination protein RecO	-
CUP3940_RS07705 (CUP3940_1504)	-	1496144..1496644 (-)	501	WP_176318640.1	hypothetical protein	-
CUP3940_RS07710 (CUP3940_1505)	ribD	1496622..1497605 (-)	984	WP_176318641.1	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	-
CUP3940_RS07715 (CUP3940_1506)	-	1497606..1498583 (-)	978	WP_176318642.1	galactosyltransferase-related protein	-
CUP3940_RS07720 (CUP3940_1507)	-	1498684..1499781 (+)	1098	Protein_1504	capsular polysaccharide biosynthesis protein	-
CUP3940_RS07725 (CUP3940_1508)	kpsS	1499801..1500988 (+)	1188	WP_176318644.1	capsule biosynthesis protein	Regulator
CUP3940_RS07730 (CUP3940_1509)	-	1501057..1502184 (+)	1128	WP_224188926.1	DUF829 domain-containing protein	-
CUP3940_RS07735 (CUP3940_1510)	-	1502186..1503547 (+)	1362	WP_176318645.1	cytochrome P450	-
CUP3940_RS07740 (CUP3940_1511)	-	1503544..1503951 (+)	408	WP_004277962.1	hypothetical protein	-
CUP3940_RS07745 (CUP3940_1512)	acpS	1503952..1504299 (-)	348	WP_176318646.1	holo-ACP synthase	-
CUP3940_RS07750 (CUP3940_1513)	fliL	1504299..1504838 (-)	540	WP_176318647.1	flagellar basal body-associated protein FliL	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 46294.90 Da
• Isoelectric Point: 9.8411

>NTDB_id=448156 CUP3940_RS07725 WP_176318644.1 1499801..1500988(+) (kpsS) [Campylobacter upsaliensis RM3940]
MQFDLLLKKEFSGKNVALLQGPVGNFFSRLGAKLKKMDAKIVKINFNGGDFFFYPKGRIYRGSKENLAAFYEDFFTQNQI
EVVLMYNDCRFVNHTGLEVAKKLGIAVWVFEEGYLRPYCITLEKDGVNANSTMPRDKNFYLSLNLKDVGTEIKKIPGGFK
FMGFYSFLYWFFAFILAPFFHNSLHHRPLNPLEMFAWFKALFLKYKYKISEKRLNSKIYKLEKKYFLAILQVYNDTQILN
HYKKDIEHFIEETILSFANHARAKSYLVFKHHPMDRGYRNYAALIEKLSEKYHVEGRILYVHDSYLPLLLQNALGCITIN
STVGLSAIMEGCPTKVCGEAFYDFEGLTYPKKIHFFWREAHAYKPNSLLVSQFKKYLLQTNQINGNFYKNSSLMR

Nucleotide

• Length: 1188 bp

>NTDB_id=448156 CUP3940_RS07725 WP_176318644.1 1499801..1500988(+) (kpsS) [Campylobacter upsaliensis RM3940]
ATGCAATTTGATCTTTTGTTAAAAAAAGAATTTAGTGGTAAAAATGTCGCACTTTTACAAGGTCCTGTGGGAAATTTCTT
CTCGCGTTTGGGAGCAAAGCTTAAAAAAATGGACGCGAAAATTGTAAAAATCAATTTTAACGGCGGAGACTTTTTCTTTT
ATCCTAAGGGACGAATTTATAGAGGTAGCAAAGAAAATTTAGCCGCTTTTTATGAGGATTTTTTCACGCAAAATCAAATT
GAGGTCGTTTTGATGTATAATGACTGCCGCTTTGTCAATCATACAGGCTTGGAAGTCGCCAAAAAGCTAGGCATTGCGGT
GTGGGTTTTTGAGGAGGGGTATTTAAGACCTTATTGTATCACCTTAGAAAAAGATGGGGTTAATGCAAACTCGACTATGC
CACGCGATAAAAATTTCTATTTAAGCTTAAATTTAAAAGATGTCGGCACTGAGATAAAGAAAATACCGGGTGGCTTTAAA
TTTATGGGCTTTTATAGCTTTTTATACTGGTTTTTTGCCTTTATTTTAGCTCCATTTTTTCATAATTCTTTGCATCACCG
TCCTTTAAATCCTTTAGAAATGTTTGCTTGGTTTAAGGCTTTGTTTTTAAAATACAAGTATAAAATCAGTGAAAAAAGGC
TCAATTCTAAAATTTATAAACTAGAAAAAAAATATTTTTTAGCCATTTTACAAGTCTATAATGACACACAAATTTTAAAT
CACTACAAAAAAGATATCGAGCATTTTATCGAAGAAACTATCCTTTCTTTCGCTAATCACGCAAGAGCTAAATCCTACCT
CGTCTTTAAACATCACCCTATGGATAGAGGGTATAGAAATTACGCCGCTTTGATAGAAAAATTAAGCGAGAAATACCATG
TCGAAGGACGCATTTTATATGTGCATGATAGCTATTTGCCACTTTTACTTCAAAATGCTCTAGGCTGCATTACCATAAAT
TCCACAGTAGGACTTAGTGCGATTATGGAAGGCTGTCCTACTAAGGTGTGTGGGGAGGCTTTTTATGATTTTGAGGGGCT
GACTTATCCTAAGAAAATTCATTTTTTCTGGCGTGAAGCCCACGCTTATAAGCCAAATTCCTTACTCGTTTCACAATTTA
AAAAATATCTCCTTCAAACAAATCAAATCAATGGCAATTTTTACAAAAATTCCTCTTTAATGAGATAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (82-388)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	72.051	98.734	0.711