Detailed information NTG0448147

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: STMM1_RS08280
• Genome accession: NZ_CP065484
• Coordinates: 1595249..1598074 (-)
• Length: 941 a.a.
• NCBI ID: WP_011681621.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MM1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1590249..1603074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STMM1_RS08240 (STMM1_08180)	efp	1590521..1591081 (-)	561	WP_011227545.1	elongation factor P	-
STMM1_RS08245 (STMM1_08185)	-	1591194..1591649 (-)	456	WP_002951893.1	deaminase	-
STMM1_RS08250 (STMM1_08190)	-	1591668..1592729 (-)	1062	WP_011681620.1	Xaa-Pro peptidase family protein	-
STMM1_RS08255 (STMM1_08195)	-	1592918..1593346 (-)	429	WP_002951896.1	hypothetical protein	-
STMM1_RS08260 (STMM1_08200)	-	1593391..1593951 (-)	561	WP_014608689.1	ABC transporter ATP-binding protein	-
STMM1_RS08265 (STMM1_08205)	-	1593953..1594321 (-)	369	WP_228874265.1	ATP-binding cassette domain-containing protein	-
STMM1_RS08270 (STMM1_08210)	-	1594530..1594721 (-)	192	WP_014727693.1	hypothetical protein	-
STMM1_RS08275 (STMM1_08215)	-	1594883..1595155 (-)	273	WP_002946573.1	DUF3923 family protein	-
STMM1_RS08280 (STMM1_08220)	uvrA	1595249..1598074 (-)	2826	WP_011681621.1	excinuclease ABC subunit UvrA	Machinery gene
STMM1_RS08285 (STMM1_08225)	-	1598383..1599327 (+)	945	WP_002951901.1	magnesium transporter CorA family protein	-
STMM1_RS08290 (STMM1_08230)	-	1599398..1600069 (+)	672	WP_011681622.1	DUF1129 domain-containing protein	-
STMM1_RS08295 (STMM1_08235)	-	1600186..1601067 (+)	882	WP_011681623.1	DUF4300 family protein	-
STMM1_RS08300 (STMM1_08240)	rpsR	1601194..1601433 (-)	240	WP_002945024.1	30S ribosomal protein S18	-
STMM1_RS08305 (STMM1_08245)	ssb	1601475..1601993 (-)	519	WP_002951905.1	single-stranded DNA-binding protein	Machinery gene
STMM1_RS08310 (STMM1_08250)	rpsF	1602005..1602295 (-)	291	WP_011681624.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103963.18 Da
• Isoelectric Point: 6.0617

>NTDB_id=448147 STMM1_RS08280 WP_011681621.1 1595249..1598074(-) (uvrA) [Streptococcus thermophilus strain MM1]
MQDKLVIRGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGL
SPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGVPYCINGHGAIKSSSVEQIVDEVLALPERTRMQILAPIVRRRK
GQHKAIFERVQKDGYVRVRVDGEIYDVTEVPELSKSKMHNIEVVVDRLVNKEGIRSRLFDSVEAALRLADGYLIVDTMDD
NELLYSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDIDLVIPDPSKTLREGALAPWNPISSNYYPAML
EQAMEQFGVDMDTPFENLKKEEQDLILYGSGDREFHFHYVNDFGRVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYM
NELSCPTCHGYRLNEAALSVRVGGEDGLNIGQISELSISDHLQEIDRLELGENEEMIARPIIKEIKDRLTFLNNVGLNYL
TLSRMAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLGNTLIVVEHDEDTMREADWLI
DVGPGAGAFGGQIIASGTPEAVARNKKSITGQYLSGAKSIPVPTERRVGNGCFIEVKGASENNLKNVSVKFPLGKLIAVT
GVSGSGKSTLVNSILKKKIAQELNRNSEKPGKHKSVTGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVRYKGKNIAEILDMTVDDAVDFF
AAIPKIARKVQTIKDVGLGYVTLGQSATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLQRFVD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGVGGGTIVATGTPEEVVAVPKSYTGQYLKEKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=448147 STMM1_RS08280 WP_011681621.1 1595249..1598074(-) (uvrA) [Streptococcus thermophilus strain MM1]
ATGCAAGATAAGTTAGTGATTCGCGGAGCAAGAGCTCACAATTTAAAAAATATTGATGTAGAGATTCCTCGTGACAAGCT
CGTCGTCGTGACGGGGTTGTCGGGGTCTGGTAAGTCTTCTTTGGCTTTTGATACAATTTATGCAGAGGGTCAGCGCCGTT
ATGTTGAAAGTCTCTCAGCTTATGCCCGCCAATTCTTGGGAAATATGGAGAAACCTGATGTGGACTCGATTGATGGCTTG
AGTCCTGCCATCTCCATTGATCAGAAAACAACGAGTAAGAACCCTCGTTCGACTGTGGGAACTGTAACGGAGATTAATGA
CTATCTTCGTCTCCTTTATGCGCGTGTGGGTGTGCCTTATTGTATCAATGGGCATGGAGCCATTAAGTCGTCATCAGTGG
AACAGATTGTAGATGAGGTTTTAGCCCTTCCTGAACGGACACGTATGCAGATTTTAGCGCCGATTGTCCGTCGTCGAAAG
GGGCAACACAAGGCGATTTTTGAGCGCGTGCAGAAGGACGGTTATGTTCGTGTTCGTGTGGATGGTGAGATATACGATGT
GACGGAAGTCCCTGAGCTATCCAAGTCGAAGATGCATAATATTGAGGTGGTTGTGGACCGTTTGGTTAATAAGGAAGGTA
TCCGTAGTCGTCTCTTTGACTCAGTCGAGGCAGCGCTACGTTTAGCGGATGGCTACTTGATTGTGGATACTATGGATGAT
AATGAATTGCTCTACTCGGAGCATTATTCTTGTCCAGTTTGTGGTTTTACAGTGCCTGAGTTGGAGCCGCGTCTCTTTTC
CTTCAATGCGCCATTTGGTTCTTGTCCGACCTGTGACGGTTTAGGAAATAAACTAGAAGTTGATATTGATTTGGTCATTC
CTGACCCTAGTAAGACCTTGCGTGAAGGTGCACTAGCGCCTTGGAATCCTATCTCATCCAACTACTATCCTGCCATGCTT
GAGCAGGCCATGGAACAGTTTGGCGTGGATATGGATACGCCATTTGAAAATCTTAAAAAAGAAGAACAAGATTTGATTCT
CTACGGATCTGGTGACCGCGAGTTCCATTTCCATTATGTTAATGATTTTGGTAGGGTGCGTGATATTGACATTCCTTTTG
AAGGGGTTGTGACTAATATCAATCGACGCTATCATGAGACTAACAGTGATTTCACCCGCAATGTCATGCGTGGTTATATG
AATGAACTGTCATGTCCAACTTGTCATGGCTATCGTCTTAACGAAGCAGCACTCTCGGTTCGTGTTGGTGGTGAGGATGG
CTTAAATATTGGTCAAATTTCTGAGCTGTCTATTTCTGATCATCTTCAAGAAATAGATCGCCTTGAATTAGGTGAGAATG
AAGAAATGATTGCCCGTCCAATTATCAAGGAAATCAAGGATCGTCTGACTTTCTTAAACAATGTCGGCCTTAATTACTTG
ACTCTCTCTCGTATGGCCGGAACACTTTCAGGTGGTGAGAGTCAGCGTATCCGTTTGGCGACACAGATTGGCTCCAACCT
TTCTGGAGTCCTTTATGTTTTGGATGAGCCCTCTATAGGTCTTCATCAGCGTGATAATGATCGCTTGATTTCAAGTCTTA
AAAAGATGCGTGATTTGGGCAATACCTTAATTGTGGTGGAGCATGATGAAGATACCATGCGTGAAGCTGACTGGCTTATC
GATGTAGGACCTGGCGCCGGTGCCTTTGGTGGACAAATCATAGCTTCAGGAACCCCAGAAGCAGTTGCTAGAAATAAGAA
ATCAATTACTGGTCAGTACCTGTCAGGTGCTAAATCAATTCCTGTACCGACGGAACGCCGTGTAGGAAACGGCTGTTTTA
TCGAGGTTAAAGGAGCCAGTGAAAATAATCTTAAAAATGTGTCTGTCAAGTTCCCACTTGGAAAATTAATCGCAGTGACA
GGCGTTTCTGGTTCTGGAAAGTCAACTTTGGTTAACAGTATTCTCAAGAAAAAGATTGCCCAAGAGCTTAATCGAAACAG
TGAGAAACCTGGGAAACATAAATCGGTGACTGGAATCGAGAATATCGAGCGTTTGATTGATATTGATCAAAGTCCAATCG
GGCGTACTCCACGTTCCAACCCTGCAACCTACACAGGCGTCTTCGACGATATTCGCGATCTTTTTGCTCAAACCAATGAG
GCCAAGATTCGCGGTTATAAGAAGGGACGTTTCTCTTTCAATGTCAAAGGTGGCCGTTGTGAAGCCTGCTCTGGTGATGG
GATTATCAAGATTGAGATGCACTTCTTGCCTGATGTTTATGTACCTTGTGAGGTTTGCCATGGCACACGCTATAATTCTG
AGACCTTAGAAGTTCGTTATAAAGGGAAGAATATTGCTGAAATTCTGGATATGACAGTTGATGACGCGGTTGATTTCTTT
GCGGCTATCCCTAAGATTGCTCGTAAGGTGCAGACAATCAAGGATGTGGGGCTCGGGTATGTGACTTTGGGGCAATCAGC
AACAACCCTATCAGGTGGTGAGGCACAGCGTATGAAACTGGCTAGTGAACTTCACAAACGCTCTACTGGGAAGTCTTTCT
ACATTCTCGATGAGCCTACGACTGGTCTCCATACAGATGACATTGCTCGTCTCTTGAAGGTGCTTCAGCGTTTTGTGGAC
GATGGTAACACGGTTCTCGTGATTGAGCACAATCTGGATGTTATTAAGACAGCAGACCATATCATTGATTTGGGTCCTGA
AGGTGGTGTTGGTGGAGGTACTATCGTAGCTACAGGGACTCCAGAAGAGGTAGTAGCCGTTCCCAAAAGCTATACAGGAC
AATATTTGAAAGAAAAATTGAAATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

• UvrA interaction domain (UvrA_inter) (132-239)

• ABC transporter (ABC_tran) (624-860)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	85	99.894	0.849
uvrA	Streptococcus pneumoniae TIGR4	85	99.894	0.849
uvrA	Streptococcus pneumoniae D39	85	99.894	0.849