Detailed information NTG0448124

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CORN_RS01620
• Genome accession: NZ_CP053848
• Coordinates: 297976..299136 (+)
• Length: 386 a.a.
• NCBI ID: WP_066007241.1
• Uniprot ID: A0A6M8MU23
• Organism: Campylobacter ornithocola strain LMG 29815
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 292976..304136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CORN_RS01590 (CORN_0317)	-	293258..293614 (-)	357	WP_066007258.1	hypothetical protein	-
CORN_RS01595 (CORN_0318)	-	293631..294005 (-)	375	WP_066007256.1	hypothetical protein	-
CORN_RS01600 (CORN_0319)	-	294002..294271 (-)	270	WP_066007254.1	hypothetical protein	-
CORN_RS01605 (CORN_0320)	-	294315..294872 (-)	558	WP_245162277.1	DUF2589 domain-containing protein	-
CORN_RS01610 (CORN_0321)	-	294926..295531 (-)	606	WP_066007245.1	DUF2589 domain-containing protein	-
CORN_RS01615 (CORN_0322)	-	295952..297979 (+)	2028	WP_066007243.1	capsular polysaccharide biosynthesis protein	-
CORN_RS01620 (CORN_0323)	kpsS	297976..299136 (+)	1161	WP_066007241.1	capsular biosynthesis protein	Regulator
CORN_RS08390 (CORN_0324)	-	299151..300659 (-)	1509	WP_066007239.1	SGNH/GDSL hydrolase family protein	-
CORN_RS01630 (CORN_0325)	-	300824..301954 (+)	1131	WP_066007237.1	DUF829 domain-containing protein	-
CORN_RS01635 (CORN_0326)	-	301964..303337 (+)	1374	WP_066007235.1	cytochrome P450	-
CORN_RS01640 (CORN_0327)	-	303334..303687 (+)	354	WP_066007229.1	hypothetical protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 45723.33 Da
• Isoelectric Point: 10.1942

>NTDB_id=448124 CORN_RS01620 WP_066007241.1 297976..299136(+) (kpsS) [Campylobacter ornithocola strain LMG 29815]
MNLSKKLKKFSGKNVLLLQGPVGGFFCKIATKIPKAKVYKVNFNGGDFFFYPFKSINYTKSLAKLENFYKKLFEEKQIQV
ILMYNDCRKVHEIAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFRNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKVTEKSLNEKILSLKQKYFLAVLQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYKDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINTRGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDVVLHAKFRNYVIYKTQINGNFF

Nucleotide

• Length: 1161 bp

>NTDB_id=448124 CORN_RS01620 WP_066007241.1 297976..299136(+) (kpsS) [Campylobacter ornithocola strain LMG 29815]
ATGAATTTAAGTAAAAAATTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGACCCGTGGGAGGTTTTTTTTG
TAAAATCGCTACGAAAATCCCAAAAGCAAAGGTTTATAAAGTAAATTTTAATGGCGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTATACTAAAAGTTTAGCTAAGCTTGAAAACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATCCAAGTT
ATCTTGATGTATAATGACTGCAGAAAAGTACACGAAATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGATATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGGGTTAATGCAAACTCGACTCTACCAAGAG
AAAAAGAATTTTATCTGAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACCTTCTCAAGTACCTTTAGAAATATG
GCTTTTGCCTCATTTTTGTATTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCACAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGTTTTGCTCGGTATATAGAAAAAACAAATACAAAGTTACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCTTTGAAACAAAAGTATTTTTTAGCTGTTTTGCAAGTACATAATGATACTCAGCTTTCTCATCATTAT
AAAAAAACTACGGAGAAATTTATAGAGGAGGTGATTATTTCTTTTGCCAATCACGCTAAGGCAAAGTCTTACTTGGTTTT
TAAGCACCATCCTATGGATCGTGGTTATAAAGATTATACAAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTTGAGG
GTAGAATTTTATATGTACATGATTTGCATTTACCTACACTTTTAATCAATACAAGGGGTACTATAGTGATAAATAGCACA
GTAGGACTTTCTGCTTTATATCATAATAGTCCTTTAAAAGTTATGGGAAAAGCGTTTTATGATATAGAAGGTTTAACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCATATAAACCTGATGTTGTTTTGCATGCTAAATTTAGAAACT
ATGTGATATATAAAACCCAAATCAATGGAAATTTTTTTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

3D structure

• AlphaFold DB: A0A6M8MU23

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.821	100	0.635