Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STMM1_RS04190 Genome accession   NZ_CP065484
Coordinates   788911..789393 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain MM1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 783911..794393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM1_RS04170 (STMM1_04130) queG 784784..785902 (+) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -
  STMM1_RS04175 (STMM1_04135) prfB 785955..787053 (+) 1099 WP_116920253.1 peptide chain release factor 2 -
  STMM1_RS04180 (STMM1_04140) ftsE 787141..787833 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STMM1_RS04185 (STMM1_04145) ftsX 787826..788755 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STMM1_RS04190 (STMM1_04150) mutX 788911..789393 (+) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  STMM1_RS04195 (STMM1_04155) - 789404..790582 (+) 1179 WP_071417361.1 AI-2E family transporter -
  STMM1_RS04200 (STMM1_04160) - 790572..791801 (+) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  STMM1_RS04205 (STMM1_04165) lepB 791924..792481 (+) 558 WP_071417362.1 signal peptidase I -
  STMM1_RS04210 (STMM1_04170) pepT 792689..793912 (+) 1224 WP_071417363.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=448109 STMM1_RS04190 WP_011226072.1 788911..789393(+) (mutX) [Streptococcus thermophilus strain MM1]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=448109 STMM1_RS04190 WP_011226072.1 788911..789393(+) (mutX) [Streptococcus thermophilus strain MM1]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706