Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   STMM1_RS02820 Genome accession   NZ_CP065484
Coordinates   528466..530253 (+) Length   595 a.a.
NCBI ID   WP_023909489.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 523466..535253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM1_RS02810 (STMM1_02790) - 524419..525668 (+) 1250 Protein_494 ISL3 family transposase -
  STMM1_RS02815 (STMM1_02795) rcrP 526717..528453 (+) 1737 WP_071417402.1 ABC transporter ATP-binding protein Regulator
  STMM1_RS02820 (STMM1_02800) rcrQ 528466..530253 (+) 1788 WP_023909489.1 ABC transporter ATP-binding protein Regulator
  STMM1_RS02825 (STMM1_02805) queA 530351..531394 (-) 1044 WP_011680873.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  STMM1_RS02830 (STMM1_02810) - 531544..532245 (+) 702 WP_014608085.1 glucosamine-6-phosphate deaminase -
  STMM1_RS02835 (STMM1_02815) - 532411..533706 (-) 1296 WP_041827318.1 GHKL domain-containing protein -
  STMM1_RS02840 (STMM1_02820) - 533706..534416 (-) 711 WP_011680876.1 LytTR family DNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66558.68 Da        Isoelectric Point: 5.1433

>NTDB_id=448095 STMM1_RS02820 WP_023909489.1 528466..530253(+) (rcrQ) [Streptococcus thermophilus strain MM1]
MKDNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVIMSVIEPVVIGLAITELTKNTLDIIKGVAGAHINVSYVGLV
LVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMIEKINRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVV
NAIFTLALVIGTVLYLNLQLGAVVVITISISYFGARFIMNKSQPYFKQQADALGTLNGFVQENLTGFNVIKLFGREGRSL
DDFKEITEDLQKVGFKANFISGLMMPFLNGLSDLTYLIIAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVIFNHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRKDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEINQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=448095 STMM1_RS02820 WP_023909489.1 528466..530253(+) (rcrQ) [Streptococcus thermophilus strain MM1]
ATGAAGGATAATAAAAAGAAAACAACTCATTCCTCAAGTTTTGGCCGCCTTTGGTCATACTTGCAGGTTTATCGTTTCCC
ACTTTACTTAGCTATTTTCCTGAAAATTATTAGTGTCATCATGAGTGTTATTGAGCCGGTGGTCATTGGTTTAGCCATTA
CGGAACTGACTAAAAATACACTGGACATCATTAAGGGGGTAGCAGGTGCTCATATCAACGTGTCCTACGTTGGTTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATCTATGAGTTGGCTTCTTACTATTCCAACTATTTTATGACCAATGCCGTGCA
AGCAACGGTTCAGGATATGCGAAATGAGATGATTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCAACAAT
TTGGAGACCTTTTGGGTCGCTTTACTAGTGACGTCGAGACAGTTTCAAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTC
AACGCCATCTTTACTCTAGCCTTGGTTATTGGGACAGTGCTTTACCTTAATCTTCAGTTGGGAGCTGTGGTTGTTATCAC
TATTTCGATTTCTTACTTTGGTGCTCGCTTCATTATGAATAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGATTAAACTTTTTGGACGTGAGGGTAGATCTTTA
GACGACTTTAAAGAAATTACGGAAGACCTTCAAAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTTT
CCTTAATGGTTTATCTGACTTGACCTATCTAATTATTGCCGTCCTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCTTTCGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGCTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTGATGGATGAACCAGATGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTAACTGGTCAAGTTATCTTTAATCATGTGGACTTCCAGTATGTAGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCTATTGTCGGTCCTACCGGTGCTGGAAAATCAACTATTATCAAT
CTTCTCATGCGTTTCTATGATGTTACTGCAGGTTCTATCTCGGTTGATGGCCATGATATACGCAACTTGTCGCGTAAAGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCAGCGAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGCTACAACATGGAAATAAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATAGCCCGTGCACT
TTTGGCTGACCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACACTTATGCAAGGTCGAACAAGTTTTGTCATCGCTCACCGTTTATCAACAATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGACAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTCTATTACGATTT
GTATAATAGTCAATTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.689

100

0.427