Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STMM1_RS02565 Genome accession   NZ_CP065484
Coordinates   475253..476059 (+) Length   268 a.a.
NCBI ID   WP_023909459.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 470253..481059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM1_RS02545 (STMM1_02530) tuf 471302..472498 (+) 1197 WP_002949971.1 elongation factor Tu -
  STMM1_RS02550 (STMM1_02535) tpiA 472747..473505 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  STMM1_RS02555 (STMM1_02540) tmk 473743..474372 (+) 630 WP_014608059.1 dTMP kinase -
  STMM1_RS02560 (STMM1_02545) - 474381..475256 (+) 876 WP_014727360.1 DNA polymerase III subunit delta' -
  STMM1_RS02565 (STMM1_02550) yaaT 475253..476059 (+) 807 WP_023909459.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STMM1_RS02570 (STMM1_02555) yabA 476046..476366 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  STMM1_RS02575 (STMM1_02560) rsmI 476369..477235 (+) 867 WP_014608062.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STMM1_RS02580 (STMM1_02565) - 477372..478607 (+) 1236 WP_024704224.1 ammonium transporter -
  STMM1_RS02585 (STMM1_02570) - 478618..478959 (+) 342 WP_071417556.1 P-II family nitrogen regulator -
  STMM1_RS02590 (STMM1_02575) - 479057..479713 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  STMM1_RS02595 (STMM1_02580) - 479736..480557 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  STMM1_RS02600 (STMM1_02585) - 480576..481046 (-) 471 Protein_452 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29843.27 Da        Isoelectric Point: 4.6447

>NTDB_id=448093 STMM1_RS02565 WP_023909459.1 475253..476059(+) (yaaT) [Streptococcus thermophilus strain MM1]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMRVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFDKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=448093 STMM1_RS02565 WP_023909459.1 475253..476059(+) (yaaT) [Streptococcus thermophilus strain MM1]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCCGTGGATTTGAATAGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGAGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTATC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGACAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.948

99.627

0.418