Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | AEBR_RS13605 | Genome accession | NZ_CP053836 |
| Coordinates | 2765853..2766230 (+) | Length | 125 a.a. |
| NCBI ID | WP_129087407.1 | Uniprot ID | A0A4Q1AUC3 |
| Organism | Halarcobacter ebronensis strain LMG 27922 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2760853..2771230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEBR_RS13575 (AEBR_2717) | gatC | 2761115..2761405 (+) | 291 | WP_129087413.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| AEBR_RS13580 (AEBR_2718) | - | 2761408..2761749 (+) | 342 | WP_129087412.1 | arsenate reductase family protein | - |
| AEBR_RS13585 (AEBR_2719) | - | 2761763..2762578 (-) | 816 | WP_129087411.1 | hypothetical protein | - |
| AEBR_RS13590 (AEBR_2720) | - | 2762710..2764062 (-) | 1353 | WP_129087410.1 | class II 3-deoxy-7-phosphoheptulonate synthase | - |
| AEBR_RS13595 (AEBR_2721) | - | 2764161..2765156 (-) | 996 | WP_129087409.1 | transaldolase | - |
| AEBR_RS13600 (AEBR_2722) | serB | 2765166..2765786 (-) | 621 | WP_129087408.1 | phosphoserine phosphatase SerB | - |
| AEBR_RS13605 (AEBR_2723) | dprB | 2765853..2766230 (+) | 378 | WP_129087407.1 | Holliday junction resolvase RuvX | Machinery gene |
| AEBR_RS13610 (AEBR_2724) | acpS | 2766232..2766582 (-) | 351 | WP_128982103.1 | holo-ACP synthase | - |
| AEBR_RS13615 (AEBR_2725) | - | 2766615..2767574 (+) | 960 | WP_129087406.1 | ABC transporter permease | - |
| AEBR_RS13620 (AEBR_2726) | panC | 2767594..2768412 (+) | 819 | WP_129087405.1 | pantoate--beta-alanine ligase | - |
| AEBR_RS13625 (AEBR_2727) | rimO | 2768524..2769876 (+) | 1353 | WP_129087404.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| AEBR_RS13630 (AEBR_2728) | tilS | 2769878..2770852 (+) | 975 | WP_129087403.1 | tRNA lysidine(34) synthetase TilS | - |
| AEBR_RS13635 (AEBR_2729) | - | 2770849..2771115 (-) | 267 | WP_129087402.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 125 a.a. Molecular weight: 14270.77 Da Isoelectric Point: 8.9265
>NTDB_id=448042 AEBR_RS13605 WP_129087407.1 2765853..2766230(+) (dprB) [Halarcobacter ebronensis strain LMG 27922]
MKLACIDIGLKRIGMAISLQGNIVTPLPAVLRKNRNQASNDVKKVLKEWDIDKLIIGFPSASLDMQKRVEHFTKLLDLDI
PYEFQEENMSSIEAEELIKGEIKYKRDGRIDSLAAKIILERFLSK
MKLACIDIGLKRIGMAISLQGNIVTPLPAVLRKNRNQASNDVKKVLKEWDIDKLIIGFPSASLDMQKRVEHFTKLLDLDI
PYEFQEENMSSIEAEELIKGEIKYKRDGRIDSLAAKIILERFLSK
Nucleotide
Download Length: 378 bp
>NTDB_id=448042 AEBR_RS13605 WP_129087407.1 2765853..2766230(+) (dprB) [Halarcobacter ebronensis strain LMG 27922]
TTGAAGCTAGCTTGCATAGATATAGGTCTTAAAAGAATAGGTATGGCAATATCTCTACAAGGCAATATTGTAACTCCTCT
TCCTGCTGTTTTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTAAAAAAAGTTTTAAAAGAGTGGGATATTGATAAAC
TAATTATTGGTTTTCCAAGTGCAAGTTTAGATATGCAAAAAAGAGTTGAACATTTTACCAAACTTCTTGATCTTGATATC
CCTTATGAATTCCAAGAAGAGAATATGAGTTCAATAGAAGCAGAAGAACTAATTAAAGGTGAAATAAAATATAAAAGAGA
TGGAAGAATTGACTCCCTTGCTGCAAAAATTATTTTAGAAAGATTTTTAAGTAAATAA
TTGAAGCTAGCTTGCATAGATATAGGTCTTAAAAGAATAGGTATGGCAATATCTCTACAAGGCAATATTGTAACTCCTCT
TCCTGCTGTTTTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTAAAAAAAGTTTTAAAAGAGTGGGATATTGATAAAC
TAATTATTGGTTTTCCAAGTGCAAGTTTAGATATGCAAAAAAGAGTTGAACATTTTACCAAACTTCTTGATCTTGATATC
CCTTATGAATTCCAAGAAGAGAATATGAGTTCAATAGAAGCAGAAGAACTAATTAAAGGTGAAATAAAATATAAAAGAGA
TGGAAGAATTGACTCCCTTGCTGCAAAAATTATTTTAGAAAGATTTTTAAGTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
49.242 |
100 |
0.52 |