Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   CARM_RS01465 Genome accession   NZ_CP053825
Coordinates   273318..274496 (+) Length   392 a.a.
NCBI ID   WP_139424433.1    Uniprot ID   A0A7L5HJ22
Organism   Campylobacter armoricus strain CCUG 73571     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 268318..279496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CARM_RS01450 (CARM_0287) cysC 269043..269627 (+) 585 WP_139424429.1 adenylyl-sulfate kinase -
  CARM_RS08410 (CARM_0288) - 269624..271231 (+) 1608 WP_244948520.1 hypothetical protein -
  CARM_RS01460 (CARM_0289) - 271294..273321 (+) 2028 WP_139424431.1 capsular polysaccharide biosynthesis protein -
  CARM_RS01465 (CARM_0290) kpsS 273318..274496 (+) 1179 WP_139424433.1 capsular biosynthesis protein Regulator
  CARM_RS01470 (CARM_0291) - 274493..276028 (-) 1536 WP_176300985.1 SGNH/GDSL hydrolase family protein -
  CARM_RS01475 (CARM_0292) - 276193..277329 (+) 1137 WP_139424435.1 DUF829 domain-containing protein -
  CARM_RS01480 (CARM_0293) - 277339..278706 (+) 1368 WP_139424437.1 cytochrome P450 -
  CARM_RS01485 (CARM_0294) - 278709..279062 (+) 354 WP_139424439.1 succinylglutamate desuccinylase -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 46637.30 Da        Isoelectric Point: 10.2548

>NTDB_id=447919 CARM_RS01465 WP_139424433.1 273318..274496(+) (kpsS) [Campylobacter armoricus strain CCUG 73571]
MNLSKKLKKFSGKNVLLLQGPVGSFFRKISTKIPKAKVYKVNFNGGDFFFYPFKSINYTKSLAKLEDFYKKLFEEKQIQV
VLMYNDCRKVHEIAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFNKDFKFKTFSNTFRNM
AFASFLYWFFAFLFSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKNLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKSIEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYIHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDIVLHTKFRNYVIYKTQINGNFFKNTSLD

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=447919 CARM_RS01465 WP_139424433.1 273318..274496(+) (kpsS) [Campylobacter armoricus strain CCUG 73571]
ATGAATTTAAGTAAAAAGTTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGACCTGTGGGAAGTTTTTTTCG
TAAAATTTCTACAAAAATACCAAAAGCTAAGGTTTATAAAGTAAATTTTAATGGTGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTACACTAAAAGTTTAGCTAAACTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
GTCTTGATGTATAATGATTGTAGAAAAGTTCATGAGATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAGGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCGACCCTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTAACAAAGATTTTAAATTTAAAACTTTTTCAAACACTTTTAGAAATATG
GCTTTTGCTTCATTTTTATACTGGTTTTTTGCTTTTTTATTTTCCTGGTATTTTAATAATTCCTTACACCATAGAAGTTT
AAAATTATTTGATTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAATTTAAATG
AAAAAATTCTTTCATTAAAACAAAAGTATTTTTTAGCTATTTTGCAAGTGCATAATGATACACAACTTTCGCATCATTAT
AAAAAAAGCATAGAAAAATTTATAGAAGAAGTGATTATTTCTTTTGCTAATCATGCTAAAGCAAAGTCTTATTTAGTTTT
TAAGCATCATCCTATGGATCGTGGCTATAGGGATTATACTAAGCTTATAGAAGATTTGAGTTTAAAATACAATGTTGAAG
GTAGAATTTTGTATATACATGATTTGCATTTGCCCACGCTTTTGATTAATGCAAGAGGCACAATAGTCATAAATAGCACA
GTAGGTCTTTCTGCTTTATATCACAATAGTCCTTTAAAAGTTATGGGAAAAGCATTTTATGATATAGAAGGCTTAACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGTAGAGCATATAAACCTGACATAGTTTTACATACTAAATTTAGAAATT
ATGTGATATATAAAACTCAAATCAATGGAAATTTTTTTAAAAATACTAGTTTAGACTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(80-386)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L5HJ22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.626

100

0.633