Detailed information NTG0447826

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HPY11_RS01250
• Genome accession: NZ_CP053820
• Coordinates: 262303..263310 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain SA10G
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 257303..268310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY11_RS01230 (HPY11_01230)	metJ	257307..257624 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
HPY11_RS01235 (HPY11_01235)	-	257735..259012 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
HPY11_RS01240 (HPY11_01240)	rpmE	259320..259538 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
HPY11_RS01245 (HPY11_01245)	priA	259793..261997 (+)	2205	WP_175245881.1	primosomal protein N'	-
HPY11_RS01250 (HPY11_01250)	cytR	262303..263310 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
HPY11_RS01255 (HPY11_01255)	-	263481..264032 (+)	552	WP_175245882.1	SPOR domain-containing protein	-
HPY11_RS01260 (HPY11_01260)	hslV	264169..264726 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
HPY11_RS01265 (HPY11_01265)	hslU	264792..266123 (+)	1332	WP_001293366.1	HslU--HslV peptidase ATPase subunit	-
HPY11_RS01270 (HPY11_01270)	-	266227..267144 (+)	918	WP_175245883.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HPY11_RS01275 (HPY11_01275)	rraA	267219..267734 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=447826 HPY11_RS01250 WP_000224452.1 262303..263310(+) (cytR) [Vibrio cholerae strain SA10G]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=447826 HPY11_RS01250 WP_000224452.1 262303..263310(+) (cytR) [Vibrio cholerae strain SA10G]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTATTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTTCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCACAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGTGGACATGATGTGCGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904