Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST90730_RS05275 Genome accession   NZ_CP065481
Coordinates   999262..999744 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain 90730     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 994262..1004744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90730_RS05255 (ST90730_05290) pepT 994742..995965 (-) 1224 WP_011226068.1 peptidase T -
  ST90730_RS05260 (ST90730_05295) lepB 996174..996731 (-) 558 WP_002953084.1 signal peptidase I -
  ST90730_RS05265 (ST90730_05300) - 996854..998083 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  ST90730_RS05270 (ST90730_05305) - 998073..999251 (-) 1179 WP_011227264.1 AI-2E family transporter -
  ST90730_RS05275 (ST90730_05310) mutX 999262..999744 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  ST90730_RS05280 (ST90730_05315) ftsX 999900..1000829 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  ST90730_RS05285 (ST90730_05320) ftsE 1000822..1001514 (-) 693 WP_041827149.1 cell division ATP-binding protein FtsE -
  ST90730_RS05295 (ST90730_05330) queG 1002753..1003871 (-) 1119 WP_059257434.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=447798 ST90730_RS05275 WP_011226072.1 999262..999744(-) (mutX) [Streptococcus thermophilus strain 90730]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447798 ST90730_RS05275 WP_011226072.1 999262..999744(-) (mutX) [Streptococcus thermophilus strain 90730]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706